C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heat shock protein 90, beta (Grp94), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020048 Hsp90b1 10090 - 10:86690209-86705509 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020238 Hsp90b1-001 86690840-86705509 protein_coding
  ENSMUST00000129178 Hsp90b1-002 86690209-86701968 retained_intron
  ENSMUST00000129413 Hsp90b1-003 86692401-86698438 protein_coding
  ENSMUST00000134515 Hsp90b1-004 86694021-86695721 retained_intron
  ENSMUST00000146897 Hsp90b1-005 86701946-86703093 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020238ENSMUST00000129178ENSMUST00000129413
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020238 42.284±11.50 23.913±8.25 95.677±7.03 101.660±48.84 26.382±6.38 43.989±5.51 24.100±3.94 37.721±14.08 87.811±50.14 54.056±4.06 20.169±3.62 130.548±159.69 546.910±273.41 152.497±113.21
ENSMUST00000129178 N/A 3.820±0.00 N/A N/A 5.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129413 N/A N/A N/A N/A 38.808±0.00 N/A 17.830±2.73 18.134±3.91 N/A 35.317±7.05 N/A 40.258±17.16 N/A 39.509±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005788 IEA endoplasmic reticulum lumen
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IEA focal adhesion
GO:0006457 IEA protein folding
GO:0006950 IEA response to stress
GO:0016020 IEA membrane
GO:0019903 ISO protein phosphatase binding
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0030496 IEA midbody
GO:0031012 IEA extracellular matrix
GO:0031247 ISO actin rod assembly
GO:0043066 IEA negative regulation of apoptotic process
GO:0043666 ISO regulation of phosphoprotein phosphatase activity
GO:0046790 IEA virion binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050750 ISO low-density lipoprotein particle receptor binding
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071318 ISO cellular response to ATP

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003570 hsp90b1 heat shock protein 90, beta (grp94), member 1 protein_coding Danio_rerio
ENSG00000166598 HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 protein_coding Homo_sapiens

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