C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90, beta (Grp94), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020238 Hsp90b1-001 ENSMUSG00000020048 10090 - 10:86690840-86705509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020238 42.284±11.50 23.913±8.25 95.677±7.03 101.660±48.84 26.382±6.38 43.989±5.51 24.100±3.94 37.721±14.08 87.811±50.14 54.056±4.06 20.169±3.62 130.548±159.69 546.910±273.41 152.497±113.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005788 IEA endoplasmic reticulum lumen
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005829 IEA cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IEA focal adhesion
GO:0006457 IEA protein folding
GO:0016020 IEA membrane
GO:0019903 ISO protein phosphatase binding
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0030496 IEA midbody
GO:0031012 IEA extracellular matrix
GO:0031247 ISO actin rod assembly
GO:0043066 IEA negative regulation of apoptotic process
GO:0043666 ISO regulation of phosphoprotein phosphatase activity
GO:0046790 IEA virion binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050750 ISO low-density lipoprotein particle receptor binding
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071318 ISO cellular response to ATP

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299767 HSP90B1-001 protein_coding Homo_sapiens 0 3548
ENST00000415545 HSP90B3P-001 processed_pseudogene Homo_sapiens 0 1655
ENST00000540297 HSP90B1-008 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000548462 HSP90B1-003 retained_intron Homo_sapiens 0 2265
ENST00000549334 HSP90B1-006 protein_coding Homo_sapiens 0 453
ENST00000550479 HSP90B1-009 retained_intron Homo_sapiens 0 542
ENST00000550595 HSP90B1-012 protein_coding Homo_sapiens 0 483
ENST00000551983 HSP90B1-010 retained_intron Homo_sapiens 0 750
ENST00000552051 HSP90B1-011 retained_intron Homo_sapiens 0 536
ENST00000559111 HSP90B2P-001 processed_pseudogene Homo_sapiens 0 2471
ENST00000614327 HSP90B1-201 protein_coding Homo_sapiens 0 1299

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