C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein H3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020069 Hnrnph3 10090 - 10:63014664-63024217 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020263 Hnrnph3-001 63014664-63023894 protein_coding
  ENSMUST00000118898 Hnrnph3-002 63014664-63023894 protein_coding
  ENSMUST00000119814 Hnrnph3-004 63017807-63023847 protein_coding
  ENSMUST00000140743 Hnrnph3-003 63015428-63024217 nonsense_mediated_decay
  ENSMUST00000141616 Hnrnph3-006 63015431-63016168 retained_intron
  ENSMUST00000143689 Hnrnph3-005 63016418-63018084 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020263ENSMUST00000118898ENSMUST00000119814ENSMUST00000140743ENSMUST00000141616
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020263 6.272±0.00 5.624±0.93 N/A 14.420±0.00 4.950±0.00 N/A 3.768±0.00 3.570±0.98 3.033±1.20 9.500±1.38 2.039±0.07 7.248±1.40 3.756±0.32 N/A
ENSMUST00000118898 N/A 8.219±0.00 8.627±0.00 N/A 5.568±0.00 4.293±0.85 2.804±0.82 4.487±1.79 4.346±2.30 N/A 2.230±0.85 6.080±1.76 5.455±1.99 14.137±2.22
ENSMUST00000119814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 102.239±0.00
ENSMUST00000140743 4.245±1.77 N/A 14.809±0.30 32.785±4.72 4.868±2.14 N/A 7.422±2.37 4.118±1.68 10.512±4.43 N/A 4.589±1.26 66.156±51.47 16.823±14.48 25.023±16.34
ENSMUST00000141616 N/A N/A N/A N/A 8.796±1.56 N/A N/A 7.083±1.04 N/A N/A N/A 9.117±1.38 N/A 17.458±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0030855 IEA epithelial cell differentiation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039466 HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) protein_coding Danio_rerio
ENSG00000096746 HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) protein_coding Homo_sapiens

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