C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein H3 (2H9)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000096746 HNRNPH3 9606 + 10:68331174-68343191 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265866 HNRNPH3-012 68332075-68343187 protein_coding
  ENST00000354695 HNRNPH3-003 68332122-68342272 protein_coding
  ENST00000461310 HNRNPH3-010 68331721-68339546 processed_transcript
  ENST00000467249 HNRNPH3-001 68332117-68338675 processed_transcript
  ENST00000469172 HNRNPH3-004 68331174-68342273 processed_transcript
  ENST00000478698 HNRNPH3-008 68338806-68342269 processed_transcript
  ENST00000480987 HNRNPH3-011 68332076-68341287 processed_transcript
  ENST00000481819 HNRNPH3-006 68336806-68342271 processed_transcript
  ENST00000486854 HNRNPH3-009 68332103-68339201 processed_transcript
  ENST00000490442 HNRNPH3-007 68338340-68342269 processed_transcript
  ENST00000491200 HNRNPH3-005 68337616-68343191 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265866ENST00000354695ENST00000461310ENST00000467249ENST00000478698ENST00000480987ENST00000481819ENST00000486854ENST00000491200
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265866 17.045±0.00 19.943±0.00 3.819±0.00 14.653±10.31 21.669±0.00 58.151±0.00 13.626±0.00 41.353±0.00 7.223±0.13 28.017±0.00 11.924±8.78 40.826±13.26 20.480±3.02 32.887±9.35
ENST00000354695 42.915±0.00 37.063±0.00 N/A 30.036±0.00 37.646±0.00 83.341±0.00 20.484±0.00 46.168±0.00 9.620±0.00 55.958±0.00 28.344±0.00 47.957±11.62 25.407±2.22 61.147±0.00
ENST00000461310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.346±0.00 N/A
ENST00000467249 N/A N/A N/A N/A N/A 14.951±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478698 N/A 14.927±0.00 4.747±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 71.403±0.00 44.825±0.00 87.596±0.00
ENST00000481819 N/A 9.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.627±0.00 56.566±0.00 102.284±0.00
ENST00000491200 N/A N/A N/A N/A N/A N/A 1.690±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H3 CIL_0000H3_0002 CGP 10:68282660-68343191
CIL_0000PX CIL_0000PX_0002 CGP 10:68331174-68407294

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000398 NAS mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 NAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005681 NAS spliceosomal complex
GO:0006396 TAS RNA processing
GO:0008380 TAS RNA splicing
GO:0030855 IEP epithelial cell differentiation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039466 HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) protein_coding Danio_rerio
ENSMUSG00000020069 Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 protein_coding Mus_musculus

Loading