C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein H3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020263 Hnrnph3-001 ENSMUSG00000020069 10090 - 10:63014664-63023894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000020263
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000020263 6.272±0.00 5.624±0.93 14.420±0.00 4.950±0.00 3.768±0.00 3.570±0.98 3.033±1.20 9.500±1.38 2.039±0.07 7.248±1.40 3.756±0.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0030855 IEA epithelial cell differentiation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000057651 HNRNPH3-201 protein_coding Danio_rerio 0 274
ENSDART00000113082 HNRNPH3-001 protein_coding Danio_rerio 0 274
ENSDART00000059918 hnrnph1-201 protein_coding Danio_rerio 0 255
ENSDART00000015636 hnrnph1l-001 protein_coding Danio_rerio 0 243
ENST00000265866 HNRNPH3-012 protein_coding Homo_sapiens 0 2001
ENST00000316594 HNRNPH2-001 protein_coding Homo_sapiens 0 231
ENST00000329433 HNRNPH1-009 protein_coding Homo_sapiens 0 252
ENST00000354695 HNRNPH3-003 protein_coding Homo_sapiens 0 1066
ENST00000356731 HNRNPH1-001 protein_coding Homo_sapiens 0 252
ENST00000393432 HNRNPH1-006 protein_coding Homo_sapiens 0 252
ENST00000431935 HNRNPH3P1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000442819 HNRNPH1-005 protein_coding Homo_sapiens 0 252
ENST00000461310 HNRNPH3-010 processed_transcript Homo_sapiens 0 625
ENST00000463210 RUFY2-004 protein_coding Homo_sapiens 1.99993e-41 172
ENST00000466493 RUFY2-001 nonsense_mediated_decay Homo_sapiens 9.99995e-41 172
ENST00000467249 HNRNPH3-001 processed_transcript Homo_sapiens 0 785
ENST00000469172 HNRNPH3-004 processed_transcript Homo_sapiens 0 1406
ENST00000478698 HNRNPH3-008 processed_transcript Homo_sapiens 0 501
ENST00000480987 HNRNPH3-011 processed_transcript Homo_sapiens 0 466
ENST00000481819 HNRNPH3-006 processed_transcript Homo_sapiens 0 1402
ENST00000484083 RUFY2-003 processed_transcript Homo_sapiens 4.00001e-40 169
ENST00000486854 HNRNPH3-009 processed_transcript Homo_sapiens 0 909
ENST00000490442 HNRNPH3-007 processed_transcript Homo_sapiens 0 839
ENST00000491200 HNRNPH3-005 processed_transcript Homo_sapiens 0 1783
ENST00000504348 HNRNPH1-021 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000505811 HNRNPH1-015 protein_coding Homo_sapiens 0 252
ENST00000510411 HNRNPH1-008 protein_coding Homo_sapiens 0 252
ENST00000513225 HNRNPH1-013 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000514332 HNRNPH1-003 retained_intron Homo_sapiens 0 252
ENST00000515481 HNRNPH1-010 retained_intron Homo_sapiens 0 195
ENST00000515565 HNRNPH1P3-001 processed_pseudogene Homo_sapiens 0 215
ENST00000519056 HNRNPH1-045 protein_coding Homo_sapiens 0 252
ENST00000520415 HNRNPH1-036 retained_intron Homo_sapiens 0 217
ENST00000521173 HNRNPH1-049 protein_coding Homo_sapiens 2e-33 147
ENST00000521790 HNRNPH1-040 protein_coding Homo_sapiens 0 219
ENST00000522958 HNRNPH1-037 retained_intron Homo_sapiens 0 230
ENST00000523137 HNRNPH1-046 protein_coding Homo_sapiens 0 217

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