C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma associated antigen (mutated) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020365 Mum1-001 ENSMUSG00000020156 10090 + 10:80226434-80243903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020365
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020365 9.935±2.27 3.250±0.00 7.278±2.27 7.851±2.30 5.464±0.37 2.514±0.74 4.266±1.56 4.939±3.52 3.451±0.15 4.463±0.52 7.598±3.00 8.663±3.87 73.470±34.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QY CIL_0000QY_0002 CGP 10:80179482-80243903
CIL_0000QX CIL_0000QX_0002 CGP 10:80226434-80256794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006281 ISS DNA repair
GO:0006325 ISS chromatin organization
GO:0031491 ISS nucleosome binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000415183 MUM1-014 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000587460 MUM1-002 nonsense_mediated_decay Homo_sapiens 2e-34 152
ENST00000588810 MUM1-008 nonsense_mediated_decay Homo_sapiens 5e-35 152
ENST00000590695 MUM1-005 retained_intron Homo_sapiens 2e-32 145
ENST00000591337 MUM1-009 protein_coding Homo_sapiens 7.9874e-44 182
ENST00000591433 MUM1-003 nonsense_mediated_decay Homo_sapiens 2e-34 152
ENST00000591806 MUM1-001 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000592374 MUM1-007 protein_coding Homo_sapiens 2e-32 143

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