C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane BAX inhibitor motif containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020225 Tmbim4 10090 + 10:120201590-120224917 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020446 Tmbim4-001 120208750-120224917 protein_coding
  ENSMUST00000123802 Tmbim4-009 120221821-120224917 retained_intron
  ENSMUST00000134203 Tmbim4-008 120220688-120224739 retained_intron
  ENSMUST00000134797 Tmbim4-003 120208780-120217717 protein_coding
  ENSMUST00000135794 Tmbim4-007 120202651-120203208 processed_transcript
  ENSMUST00000141206 Tmbim4-002 120208793-120224839 nonsense_mediated_decay
  ENSMUST00000145015 Tmbim4-005 120201612-120203208 processed_transcript
  ENSMUST00000148678 Tmbim4-010 120221821-120224272 retained_intron
  ENSMUST00000156247 Tmbim4-006 120201590-120203215 processed_transcript
  ENSMUST00000156877 Tmbim4-004 120201658-120217562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020446ENSMUST00000134797ENSMUST00000141206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020446 53.741±6.53 40.897±10.97 52.005±3.09 17.984±4.41 57.784±11.97 72.253±22.63 55.162±5.54 278.008±23.59 55.620±23.72 53.254±1.97 38.994±4.71 52.127±12.86 51.683±19.09 103.305±43.22
ENSMUST00000134797 33.620±10.70 174.274±46.50 N/A 10.892±0.00 64.464±14.57 154.382±27.20 25.714±0.50 177.292±71.74 49.487±20.88 50.669±25.72 N/A 66.440±24.09 11.288±0.00 69.639±0.00
ENSMUST00000141206 N/A 85.289±11.15 N/A N/A N/A 32.297±0.00 N/A N/A 45.969±2.78 N/A N/A 34.364±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WI CIL_0006WI_0002 CGP 10:120083608-120202130

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005795 ISS Golgi stack
GO:0006915 IEA apoptotic process
GO:0016021 IEA integral component of membrane
GO:0043066 ISS negative regulation of apoptotic process
GO:0050848 ISS regulation of calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014361 tmbim4 transmembrane BAX inhibitor motif containing 4 protein_coding Danio_rerio
ENSG00000228144 RP11-745O10.4 Protein lifeguard 4 {ECO:0000313|Ensembl:ENSP00000451688}; Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000454670} protein_coding Homo_sapiens

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