C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1M
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020253 Ppm1m 10090 - 9:106194172-106199746 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076258 Ppm1m-002 106194172-106198942 protein_coding
  ENSMUST00000136431 Ppm1m-005 106194947-106196888 protein_coding
  ENSMUST00000140761 Ppm1m-001 106194172-106199275 protein_coding
  ENSMUST00000150731 Ppm1m-004 106197535-106198338 retained_intron
  ENSMUST00000152359 Ppm1m-003 106197945-106199746 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076258ENSMUST00000136431ENSMUST00000140761ENSMUST00000150731
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 3.511±0.49 N/A N/A
ENSMUST00000136431 41.100±0.00 N/A 11.270±2.30 3.312±0.26 N/A N/A 3.770±0.90 6.223±0.83 4.506±1.00 16.525±0.00 0.951±0.27 12.953±0.16 9.125±2.33 6.756±1.75
ENSMUST00000140761 32.728±8.94 96.342±23.90 7.054±1.26 2.397±1.22 36.378±16.70 9.401±0.77 2.748±0.46 7.572±2.08 5.198±1.34 16.489±5.53 0.677±0.30 21.084±10.54 4.952±1.63 5.974±2.60
ENSMUST00000150731 N/A N/A N/A 2.137±0.00 N/A N/A N/A N/A N/A N/A N/A 19.157±0.00 5.683±1.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004721 IDA phosphoprotein phosphatase activity
GO:0005634 IDA nucleus
GO:0006470 IDA protein dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164088 PPM1M protein phosphatase, Mg2+/Mn2+ dependent, 1M protein_coding Homo_sapiens

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