C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-phosphohydroxy-L-lysine phospholyase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020625 Phykpl-004 ENSMUSG00000020359 10090 + 11:51584789-51601328 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverENSMUST00000020625
Transcript ID Adipose Breast Heart Kidney Liver
ENSMUST00000020625 10.788±0.01 11.460±1.80 5.481±0.00 12.154±1.41 10.442±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008483 IEA transaminase activity
GO:0016829 IEA lyase activity
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308158 PHYKPL-001 protein_coding Homo_sapiens 0 1452
ENST00000323594 PHYKPL-011 protein_coding Homo_sapiens 0 580
ENST00000355836 HNRNPAB-003 protein_coding Homo_sapiens 0 241
ENST00000358344 HNRNPAB-001 protein_coding Homo_sapiens 0 241
ENST00000474052 PHYKPL-003 nonsense_mediated_decay Homo_sapiens 4e-38 163
ENST00000476170 PHYKPL-010 protein_coding Homo_sapiens 0 388
ENST00000476487 PHYKPL-002 retained_intron Homo_sapiens 0 863
ENST00000481436 PHYKPL-006 retained_intron Homo_sapiens 0 473
ENST00000489262 PHYKPL-009 retained_intron Homo_sapiens 0 1415
ENST00000493197 PHYKPL-004 nonsense_mediated_decay Homo_sapiens 0 1133
ENST00000494126 PHYKPL-005 retained_intron Homo_sapiens 0 948
ENST00000504898 HNRNPAB-008 protein_coding Homo_sapiens 0 241
ENST00000506001 PHYKPL-018 retained_intron Homo_sapiens 0 514
ENST00000506045 PHYKPL-015 nonsense_mediated_decay Homo_sapiens 6e-24 115
ENST00000506259 HNRNPAB-004 protein_coding Homo_sapiens 0 241
ENST00000506339 HNRNPAB-005 protein_coding Homo_sapiens 0 241
ENST00000510913 PHYKPL-013 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000510991 PHYKPL-017 retained_intron Homo_sapiens 0 228
ENST00000511716 PHYKPL-019 processed_transcript Homo_sapiens 0 372
ENST00000514424 PHYKPL-012 retained_intron Homo_sapiens 0 374
ENST00000514633 HNRNPAB-002 protein_coding Homo_sapiens 0 241
ENST00000515193 HNRNPAB-006 protein_coding Homo_sapiens 0 241
ENST00000615932 HNRNPAB-201 protein_coding Homo_sapiens 0 241

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