C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RUN and FYVE domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020375 Rufy1 10090 - 11:50389286-50431125 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020643 Rufy1-001 50389286-50431125 protein_coding
  ENSMUST00000129304 Rufy1-003 50407908-50421991 processed_transcript
  ENSMUST00000135508 Rufy1-002 50389373-50414575 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020643ENSMUST00000129304ENSMUST00000135508
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020643 7.498±0.68 23.517±2.24 18.395±5.12 9.123±4.27 10.388±3.93 11.108±0.73 8.795±1.30 15.538±1.44 4.751±0.60 12.984±1.50 4.888±2.16 13.470±4.25 4.542±2.38 1.518±0.91
ENSMUST00000129304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.986±0.00 N/A N/A
ENSMUST00000135508 N/A N/A N/A N/A 8.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F3 CIL_0004F3_0002 CGP 11:50376990-50431125

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006897 IEA endocytosis
GO:0008289 IEA lipid binding
GO:0008565 IDA protein transporter activity
GO:0015031 IDA protein transport
GO:0016020 IEA membrane
GO:0030100 IDA regulation of endocytosis
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078685 RUFY1 RUN and FYVE domain containing 1 protein_coding Danio_rerio
ENSG00000176783 RUFY1 RUN and FYVE domain containing 1 protein_coding Homo_sapiens

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