Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	ring finger protein 130
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000020376	Rnf130	10090	+	11:50025346-50104758	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000054684		Rnf130-002	50025346-50104758	protein_coding
	ENSMUST00000102776		Rnf130-001	50025348-50104753	protein_coding
	ENSMUST00000143607		Rnf130-003	50093674-50104758	processed_transcript
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000054684	5.807±0.70	140.742±36.33	N/A	34.158±0.69	73.969±10.82	3.118±0.00	12.928±6.48	7.493±4.49	9.101±3.34	2.542±0.08	78.034±30.88	8.679±6.04	2.361±0.91
ENSMUST00000102776	33.409±10.43	N/A	31.302±4.35	25.473±6.15	18.406±3.58	11.817±3.16	31.545±6.16	23.027±10.24	24.222±7.78	20.612±0.72	28.380±15.42	13.016±13.66	6.415±1.02

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003674	ND	molecular_function
GO:0004842	ISS	ubiquitin-protein transferase activity
GO:0005634	IEA	nucleus
GO:0005737	ISS	cytoplasm
GO:0006915	IEA	apoptotic process
GO:0008270	IEA	zinc ion binding
GO:0012501	IMP	programmed cell death
GO:0016021	NAS	integral component of membrane
GO:0016567	IEA	protein ubiquitination
GO:0016874	IEA	ligase activity

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000022389	RNF130 (1 of 2)	ring finger protein 130	protein_coding	Danio_rerio
ENSG00000113269	RNF130	ring finger protein 130	protein_coding	Homo_sapiens

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