C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 130
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113269 RNF130 9606 - 5:179911651-180072118 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261947 RNF130-003 179955453-180072101 protein_coding
  ENST00000519708 RNF130-007 179966983-179980518 retained_intron
  ENST00000520564 RNF130-005 179955480-179956516 processed_transcript
  ENST00000520911 RNF130-002 179955480-180072113 nonsense_mediated_decay
  ENST00000521389 RNF130-001 179955067-180072118 protein_coding
  ENST00000521901 RNF130-006 179955480-179963943 retained_intron
  ENST00000522208 RNF130-004 179911651-180071721 protein_coding
  ENST00000523487 RNF130-008 179976774-179978287 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261947ENST00000520911ENST00000521389ENST00000522208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261947 19.600±0.00 14.114±0.00 0.979±0.00 9.309±2.60 26.221±0.00 8.779±4.89 8.748±0.00 16.655±2.09 9.174±4.48 8.853±3.71 3.325±0.00 18.593±9.10 17.862±4.00 11.208±5.41
ENST00000520911 29.976±0.00 32.392±0.00 1.676±0.00 16.498±7.21 23.735±20.46 19.827±16.52 12.044±9.69 29.388±7.39 34.208±31.09 23.218±19.17 12.491±0.69 24.421±16.46 23.095±11.13 25.069±0.00
ENST00000521389 N/A N/A N/A N/A 2.303±0.00 N/A 1.742±0.00 5.704±0.00 2.555±0.00 7.119±0.00 N/A 5.173±0.00 N/A N/A
ENST00000522208 N/A N/A N/A 3.948±1.48 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.730±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0012501 ISS programmed cell death
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022389 RNF130 (1 of 2) ring finger protein 130 protein_coding Danio_rerio
ENSMUSG00000020376 Rnf130 ring finger protein 130 protein_coding Mus_musculus

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