C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 130
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102776 Rnf130-001 ENSMUSG00000020376 10090 + 11:50025348-50104753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102776
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102776 33.409±10.43 31.302±4.35 25.473±6.15 18.406±3.58 11.817±3.16 31.545±6.16 23.027±10.24 24.222±7.78 20.612±0.72 28.380±15.42 13.016±13.66 6.415±1.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005737 ISS cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0012501 IMP programmed cell death
GO:0016021 NAS integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261947 RNF130-003 protein_coding Homo_sapiens 0 1701
ENST00000519708 RNF130-007 retained_intron Homo_sapiens 0 377
ENST00000520564 RNF130-005 processed_transcript Homo_sapiens 0 309
ENST00000520911 RNF130-002 nonsense_mediated_decay Homo_sapiens 0 1428
ENST00000521389 RNF130-001 protein_coding Homo_sapiens 0 2172
ENST00000521901 RNF130-006 retained_intron Homo_sapiens 0 481
ENST00000522208 RNF130-004 protein_coding Homo_sapiens 0 1677

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