C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin-dependent kinase-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020389 Cdkl3 10090 + 11:52004221-52089784 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063303 Cdkl3-006 52004221-52038165 protein_coding
  ENSMUST00000063321 Cdkl3-007 52004241-52033869 protein_coding
  ENSMUST00000109076 Cdkl3-009 52004349-52027564 protein_coding
  ENSMUST00000109077 Cdkl3-201 52004221-52038165 protein_coding
  ENSMUST00000109078 Cdkl3-005 52004225-52027883 protein_coding
  ENSMUST00000109079 Cdkl3-202 52004221-52033802 protein_coding
  ENSMUST00000109080 Cdkl3-203 52004221-52038165 protein_coding
  ENSMUST00000109081 Cdkl3-204 52004221-52040593 protein_coding
  ENSMUST00000120374 Cdkl3-010 52004290-52038165 protein_coding
  ENSMUST00000121591 Cdkl3-003 52004221-52084667 protein_coding
  ENSMUST00000128853 Cdkl3-002 52027073-52085109 nonsense_mediated_decay
  ENSMUST00000135076 Cdkl3-011 52004254-52019766 protein_coding
  ENSMUST00000136021 Cdkl3-013 52033527-52089776 protein_coding
  ENSMUST00000143228 Cdkl3-001 52004265-52057563 nonsense_mediated_decay
  ENSMUST00000147874 Cdkl3-008 52027297-52033724 protein_coding
  ENSMUST00000150736 Cdkl3-004 52032362-52089778 nonsense_mediated_decay
  ENSMUST00000154701 Cdkl3-012 52032447-52089784 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063303ENSMUST00000063321ENSMUST00000109076ENSMUST00000109077ENSMUST00000109078ENSMUST00000109079ENSMUST00000109080ENSMUST00000109081ENSMUST00000120374ENSMUST00000121591ENSMUST00000128853ENSMUST00000135076ENSMUST00000143228ENSMUST00000147874ENSMUST00000154701
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063303 0.257±0.00 N/A 0.687±0.00 N/A N/A N/A N/A 0.538±0.00 0.119±0.00 0.692±0.27 0.120±0.00 0.246±0.00 N/A N/A
ENSMUST00000063321 0.406±0.07 N/A N/A 0.837±0.00 N/A 0.183±0.00 N/A 0.313±0.00 0.061±0.00 N/A N/A 1.081±0.00 N/A 42.363±12.04
ENSMUST00000109076 0.587±0.00 N/A N/A N/A N/A N/A 0.369±0.01 N/A 0.136±0.02 N/A N/A N/A N/A N/A
ENSMUST00000109077 0.342±0.04 0.476±0.00 N/A N/A 0.478±0.27 0.390±0.00 0.410±0.06 0.339±0.09 0.057±0.03 0.546±0.22 N/A 0.442±0.00 N/A N/A
ENSMUST00000109078 N/A 0.859±0.00 N/A N/A 0.387±0.00 0.173±0.00 N/A 0.332±0.18 0.156±0.04 N/A 0.199±0.00 N/A 0.233±0.00 N/A
ENSMUST00000109079 0.792±0.13 0.487±0.00 N/A 2.351±0.98 1.215±0.18 0.403±0.23 0.386±0.00 0.328±0.01 0.192±0.13 N/A N/A 0.974±0.43 0.262±0.00 37.567±10.79
ENSMUST00000109080 0.369±0.00 N/A N/A 1.966±0.00 N/A N/A 0.383±0.00 N/A 0.089±0.04 N/A N/A N/A 0.185±0.00 N/A
ENSMUST00000109081 N/A N/A N/A N/A 0.207±0.00 0.208±0.03 N/A N/A N/A N/A N/A 1.034±0.45 0.507±0.00 N/A
ENSMUST00000120374 N/A N/A N/A N/A N/A N/A 0.340±0.00 0.150±0.00 N/A N/A N/A N/A 0.093±0.00 N/A
ENSMUST00000121591 0.265±0.01 0.215±0.04 N/A N/A 0.179±0.00 N/A N/A N/A N/A 0.496±0.14 N/A N/A N/A N/A
ENSMUST00000128853 N/A N/A N/A N/A 0.219±0.02 N/A N/A N/A N/A N/A N/A 0.440±0.04 0.375±0.04 N/A
ENSMUST00000135076 N/A N/A N/A 2.661±0.00 N/A N/A N/A N/A N/A N/A N/A 1.490±0.00 1.241±0.00 144.344±0.00
ENSMUST00000143228 0.307±0.00 0.314±0.00 1.018±0.00 0.578±0.00 0.238±0.00 0.284±0.16 N/A 0.278±0.00 0.127±0.11 N/A 0.141±0.02 N/A 0.190±0.12 N/A
ENSMUST00000147874 N/A N/A N/A 6.681±0.00 N/A N/A N/A N/A N/A N/A N/A 2.797±0.00 1.449±0.01 N/A
ENSMUST00000154701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.672±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004693 IEA cyclin-dependent protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0030517 IMP negative regulation of axon extension
GO:0050775 IMP positive regulation of dendrite morphogenesis
GO:0051726 IEA regulation of cell cycle
GO:0097484 IMP dendrite extension

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000006837 CDKL3 cyclin-dependent kinase-like 3 protein_coding Homo_sapiens

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