C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143228 Cdkl3-001 ENSMUSG00000020389 10090 + 11:52004265-52057563 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMusclePlacentaENSMUST00000143228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Placenta
ENSMUST00000143228 0.307±0.00 0.314±0.00 1.018±0.00 0.578±0.00 0.238±0.00 0.284±0.16 0.278±0.00 0.127±0.11 0.141±0.02 0.190±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0030517 IMP negative regulation of axon extension
GO:0050775 IMP positive regulation of dendrite morphogenesis
GO:0097484 IMP dendrite extension

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265334 CDKL3-001 protein_coding Homo_sapiens 0 1594
ENST00000519312 CDKL3-003 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000520693 CDKL3-007 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000521118 CDKL3-006 protein_coding Homo_sapiens 0 1609
ENST00000521755 CDKL3-010 protein_coding Homo_sapiens 5e-29 132
ENST00000522501 CDKL3-009 processed_transcript Homo_sapiens 0 289
ENST00000523054 CDKL3-002 protein_coding Homo_sapiens 0 1360
ENST00000523832 CDKL3-008 protein_coding Homo_sapiens 0 1232

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