C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hepatitis A virus cellular receptor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020399 Havcr2 10090 + 11:46454935-46481255 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020668 Havcr2-001 46454935-46481255 protein_coding
  ENSMUST00000109229 Havcr2-002 46454969-46481246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020668ENSMUST00000109229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020668 0.152±0.07 0.172±0.12 0.181±0.01 0.151±0.14 0.478±0.24 0.384±0.02 0.046±0.03 0.142±0.03 0.107±0.06 1.411±0.26 0.131±0.00 0.439±0.18 0.682±0.53 0.077±0.00
ENSMUST00000109229 0.146±0.10 0.274±0.02 N/A 1.011±0.00 0.393±0.29 0.311±0.05 0.011±0.00 0.110±0.00 0.035±0.01 0.259±0.00 0.033±0.02 0.280±0.18 1.545±0.76 0.073±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094M CIL_00094M_0002 VISTA 11:45901358-46503267
CIL_000737 CIL_000737_0003 CGP 11:46454935-46538156

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040178 havcr1 hepatitis A virus cellular receptor 1 protein_coding Danio_rerio
ENSDARG00000091692 havcr2 hepatitis A virus cellular receptor 2 protein_coding Danio_rerio
ENSG00000135077 HAVCR2 hepatitis A virus cellular receptor 2 protein_coding Homo_sapiens

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