C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hepatitis A virus cellular receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000040178 havcr1 7955 - 21:28496783-28504565 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000058774 havcr1-001 28496783-28504565 protein_coding
  ENSDART00000133318 havcr1-003 28496953-28504561 protein_coding
  ENSDART00000134238 havcr1-002 28496970-28504565 protein_coding
  ENSDART00000134782 havcr1-004 28498034-28504524 protein_coding
  ENSDART00000142625 havcr1-005 28501383-28504565 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000058774ENSDART00000134238ENSDART00000134782ENSDART00000142625
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000058774 1.848±1.19 9.600±0.77 8.294±1.03 N/A 1.429±0.00
ENSDART00000134238 1.752±0.19 4.553±1.64 5.851±0.00 0.351±0.00 N/A
ENSDART00000134782 0.912±0.00 N/A N/A N/A N/A
ENSDART00000142625 3.136±1.50 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DU CIL_0003DU_0001 CGP 21:28485046-28504565
CIL_000737 CIL_000737_0001 CGP 21:28496783-28513954

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000113249 HAVCR1 hepatitis A virus cellular receptor 1 protein_coding Homo_sapiens
ENSG00000135077 HAVCR2 hepatitis A virus cellular receptor 2 protein_coding Homo_sapiens
ENSMUSG00000020399 Havcr2 hepatitis A virus cellular receptor 2 protein_coding Mus_musculus
ENSMUSG00000040405 Havcr1 hepatitis A virus cellular receptor 1 protein_coding Mus_musculus
ENSMUSG00000040413 Timd2 T cell immunoglobulin and mucin domain containing 2 protein_coding Mus_musculus
ENSMUSG00000046974 BC053393 cDNA sequence BC053393 protein_coding Mus_musculus
ENSMUSG00000078924 Gm12169 predicted gene 12169 protein_coding Mus_musculus

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