C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: target of myb1-like 1 (chicken)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020541 Tom1l1 10090 - 11:90643465-90688366 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020849 Tom1l1-001 90643465-90687607 protein_coding
  ENSMUST00000107867 Tom1l1-003 90645690-90662999 protein_coding
  ENSMUST00000107868 Tom1l1-002 90645691-90687601 protein_coding
  ENSMUST00000107869 Tom1l1-008 90645691-90687579 protein_coding
  ENSMUST00000127034 Tom1l1-005 90646229-90649929 retained_intron
  ENSMUST00000131055 Tom1l1-006 90683290-90688366 processed_transcript
  ENSMUST00000147329 Tom1l1-004 90657072-90663312 retained_intron
  ENSMUST00000154599 Tom1l1-007 90671122-90687588 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020849ENSMUST00000107867ENSMUST00000107868ENSMUST00000107869
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020849 1.139±0.51 N/A 1.781±0.49 2.003±0.27 1.400±0.38 2.210±0.61 1.592±0.20 1.788±0.19 2.875±1.64 1.367±0.31 2.801±1.18 2.637±0.80 2.819±0.59 1.209±0.31
ENSMUST00000107867 N/A N/A N/A 2.288±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000107868 1.438±0.09 4.892±0.24 2.028±0.19 5.148±0.00 N/A 4.904±2.01 1.366±0.23 1.363±0.02 7.889±3.94 2.648±0.69 1.730±0.21 8.651±6.09 6.394±2.32 2.775±0.00
ENSMUST00000107869 N/A 5.390±0.23 1.912±0.00 N/A 1.058±0.00 4.286±0.52 1.417±0.00 1.976±0.26 5.495±3.24 N/A N/A 10.850±3.36 4.252±0.80 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0005829 IEA cytosol
GO:0006886 IEA intracellular protein transport
GO:0007165 IEA signal transduction
GO:0007169 TAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 IEA membrane
GO:0017124 IEA SH3 domain binding
GO:0019901 IEA protein kinase binding
GO:0030276 IEA clathrin binding
GO:0030295 IDA protein kinase activator activity
GO:0031954 IEA positive regulation of protein autophosphorylation
GO:0032147 IEA activation of protein kinase activity
GO:0045839 IEA negative regulation of mitosis
GO:0045860 IEA positive regulation of protein kinase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141198 TOM1L1 target of myb1 (chicken)-like 1 protein_coding Homo_sapiens

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