C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: target of myb1-like 1 (chicken)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020849 Tom1l1-001 ENSMUSG00000020541 10090 - 11:90643465-90687607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020849
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020849 1.139±0.51 1.781±0.49 2.003±0.27 1.400±0.38 2.210±0.61 1.592±0.20 1.788±0.19 2.875±1.64 1.367±0.31 2.801±1.18 2.637±0.80 2.819±0.59 1.209±0.31

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0007169 TAS transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 IEA membrane
GO:0017124 IEA SH3 domain binding
GO:0030295 IDA protein kinase activator activity
GO:0045860 IEA positive regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299335 COX11-001 protein_coding Homo_sapiens 0 333
ENST00000348161 TOM1L1-005 protein_coding Homo_sapiens 0 1129
ENST00000445275 TOM1L1-002 protein_coding Homo_sapiens 0 1242
ENST00000489116 COX11P1-001 processed_pseudogene Homo_sapiens 0 274
ENST00000532540 TGFBR3-008 nonsense_mediated_decay Homo_sapiens 0.00007 55
ENST00000536554 TOM1L1-008 protein_coding Homo_sapiens 0 1020
ENST00000570371 TOM1L1-022 protein_coding Homo_sapiens 0 1081
ENST00000570965 TOM1L1-010 nonsense_mediated_decay Homo_sapiens 0 867
ENST00000570977 TOM1L1-017 retained_intron Homo_sapiens 0 422
ENST00000571319 TOM1L1-006 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000571584 COX11-002 protein_coding Homo_sapiens 0 189
ENST00000572158 TOM1L1-007 protein_coding Homo_sapiens 0 1227
ENST00000572558 COX11-005 nonsense_mediated_decay Homo_sapiens 5.60519e-45 185
ENST00000572576 TOM1L1-014 protein_coding Homo_sapiens 0 534
ENST00000574318 TOM1L1-023 protein_coding Homo_sapiens 0 241
ENST00000574653 TOM1L1-019 retained_intron Homo_sapiens 0 291
ENST00000574821 COX11-006 nonsense_mediated_decay Homo_sapiens 1e-38 163
ENST00000575333 TOM1L1-009 protein_coding Homo_sapiens 0 1050
ENST00000575882 TOM1L1-001 protein_coding Homo_sapiens 0 1356
ENST00000576370 COX11-003 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000576932 TOM1L1-003 nonsense_mediated_decay Homo_sapiens 0 780

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