C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox B9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020875 Hoxb9 10090 + 11:96271457-96276595 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000010 Hoxb9-001 96271457-96276595 protein_coding
  ENSMUST00000174042 Hoxb9-002 96271523-96276595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000010ENSMUST00000174042
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000010 0.918±0.44 85.195±11.68 1.163±0.20 0.014±0.00 0.311±0.14 11.285±2.42 8.665±1.91 0.034±0.03 N/A 0.150±0.04 1.125±0.38 0.298±0.19 0.313±0.22
ENSMUST00000174042 0.145±0.03 32.614±0.00 N/A N/A 0.296±0.17 6.638±0.00 4.928±0.31 0.023±0.01 0.080±0.05 0.126±0.06 0.888±0.50 0.127±0.08 0.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0002 VISTA 11:95992065-96592579
CIL_0004H7 CIL_0004H7_0002 CGP 11:96271457-96285315

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0009952 IGI anterior/posterior pattern specification
GO:0030879 IGI mammary gland development
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048706 IGI embryonic skeletal system development
GO:0060070 IEA canonical Wnt signaling pathway
GO:0060326 IEA cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056023 hoxb9a homeo box B9a protein_coding Danio_rerio
ENSG00000170689 HOXB9 homeobox B9 protein_coding Homo_sapiens

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