C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tandem C2 domains, nuclear
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021187 Tc2n 10090 - 12:101645443-101718523 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110047 Tc2n-002 101646565-101711905 nonsense_mediated_decay
  ENSMUST00000160715 Tc2n-004 101649033-101709536 protein_coding
  ENSMUST00000160830 Tc2n-003 101649080-101711573 protein_coding
  ENSMUST00000162735 Tc2n-001 101645443-101718523 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110047ENSMUST00000160715ENSMUST00000160830ENSMUST00000162735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 0.150±0.00 1.171±0.59
ENSMUST00000160715 0.560±0.00 N/A 2.496±0.00 0.021±0.00 0.107±0.00 N/A 0.031±0.01 0.233±0.07 0.163±0.12 N/A 0.015±0.00 0.298±0.13 0.257±0.06 1.259±0.00
ENSMUST00000160830 N/A N/A N/A N/A 0.041±0.00 0.327±0.00 N/A N/A 0.044±0.00 0.493±0.00 N/A 0.151±0.00 N/A 1.023±0.30
ENSMUST00000162735 0.124±0.15 0.140±0.09 3.570±0.41 0.041±0.02 0.164±0.10 0.731±0.44 0.023±0.01 0.098±0.06 0.083±0.06 1.655±0.26 0.008±0.00 0.526±0.45 0.118±0.07 0.201±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000538 CIL_000538_0002 CGP 12:101404673-101718523
CIL_00061L CIL_00061L_0003 CGP 12:101645443-101819055

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0010468 IEA regulation of gene expression
GO:0030193 IEA regulation of blood coagulation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095067 TC2N tandem C2 domains, nuclear protein_coding Danio_rerio
ENSG00000165929 TC2N tandem C2 domains, nuclear protein_coding Homo_sapiens

Loading