C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tandem C2 domains, nuclear
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165929 TC2N 9606 - 14:91779751-91867536 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340892 TC2N-004 91780179-91836440 protein_coding
  ENST00000360594 TC2N-003 91780955-91836447 protein_coding
  ENST00000435962 TC2N-001 91779751-91867529 protein_coding
  ENST00000554424 TC2N-006 91812016-91813828 retained_intron
  ENST00000555302 TC2N-005 91866275-91867536 processed_transcript
  ENST00000556018 TC2N-002 91782823-91836526 protein_coding
  ENST00000556590 TC2N-007 91782927-91798998 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340892ENST00000360594ENST00000435962ENST00000555302ENST00000556018ENST00000556590
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340892 1.361±0.00 1.412±0.00 0.403±0.00 0.297±0.00 1.003±0.00 4.144±0.00 0.506±0.14 1.165±0.00 0.662±0.51 4.767±0.00 0.638±0.00 1.247±0.59 0.228±0.19 1.789±0.46
ENST00000360594 1.606±0.00 1.839±0.00 N/A 0.272±0.00 0.836±0.00 N/A 0.435±0.00 0.436±0.35 0.063±0.00 N/A N/A 2.287±1.55 0.437±0.05 0.952±0.00
ENST00000435962 0.942±0.00 1.232±0.00 0.696±0.00 0.617±0.00 1.722±0.40 4.410±2.01 0.561±0.00 0.355±0.00 3.471±0.00 5.094±1.72 0.251±0.00 0.409±0.00 N/A 1.334±0.00
ENST00000555302 N/A N/A N/A N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A
ENST00000556018 3.176±0.00 2.503±0.00 N/A 0.247±0.00 N/A 6.384±0.00 N/A N/A 2.509±0.00 N/A 0.501±0.00 2.638±0.00 0.408±0.16 3.914±0.36
ENST00000556590 N/A N/A N/A N/A N/A N/A N/A 0.371±0.00 N/A N/A N/A 4.767±0.00 1.186±0.00 5.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707
CIL_000538 CIL_000538_0001 CGP 14:91580696-91867536
CIL_00061L CIL_00061L_0002 CGP 14:91779751-91947987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0010468 IMP regulation of gene expression
GO:0030193 IMP regulation of blood coagulation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095067 TC2N tandem C2 domains, nuclear protein_coding Danio_rerio
ENSMUSG00000021187 Tc2n tandem C2 domains, nuclear protein_coding Mus_musculus

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