C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: YY1 transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021264 Yy1 10090 + 12:108792973-108816632 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021692 Yy1-001 108792973-108816632 protein_coding
  ENSMUST00000126912 Yy1-002 108806239-108815564 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021692 5.169±0.70 15.986±1.92 18.054±0.11 19.704±4.21 12.117±8.57 12.711±2.37 1.495±0.05 4.473±1.73 11.288±8.09 7.158±2.32 5.967±0.48 20.879±10.05 26.040±2.83 4.186±1.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032R CIL_00032R_0002 CGP 12:108686792-108816632
CIL_0004AD CIL_0004AD_0002 CGP 12:108792973-108835883

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000400 IEA four-way junction DNA binding
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003723 ISO RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006403 IMP RNA localization
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007283 IMP spermatogenesis
GO:0009952 IGI anterior/posterior pattern specification
GO:0010225 IMP response to UV-C
GO:0010628 IDA positive regulation of gene expression
GO:0030154 IEA cell differentiation
GO:0031011 IEA Ino80 complex
GO:0031519 IDA PcG protein complex
GO:0034644 IEA cellular response to UV
GO:0034696 IEA response to prostaglandin F
GO:0044212 ISO transcription regulatory region DNA binding
GO:0046872 IEA metal ion binding
GO:0048593 IGI camera-type eye morphogenesis
GO:0051276 IMP chromosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027978 yy1b YY1 transcription factor b protein_coding Danio_rerio
ENSDARG00000042796 yy1a YY1 transcription factor a protein_coding Danio_rerio
ENSG00000100811 YY1 YY1 transcription factor protein_coding Homo_sapiens

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