C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: farnesyl diphosphate farnesyl transferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021273 Fdft1 10090 - 14:63145153-63177793 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054963 Fdft1-201 63145153-63177793 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000054963
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000054963 25.342±10.15 46.852±9.34 30.861±1.37 41.833±16.71 100.306±19.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PQ CIL_0007PQ_0002 VISTA 14:62762164-63363066
CIL_000919 CIL_000919_0002 VISTA 14:62906721-63507169
CIL_0008Y4 CIL_0008Y4_0002 VISTA 14:63067789-63669845
CIL_00051N CIL_00051N_0002 CGP 14:63122462-63177793

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004310 IEA farnesyl-diphosphate farnesyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006695 IEA cholesterol biosynthetic process
GO:0008299 IEA isoprenoid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045338 IEA farnesyl diphosphate metabolic process
GO:0051996 IEA squalene synthase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060260 FDFT1 farnesyl-diphosphate farnesyltransferase 1 protein_coding Danio_rerio
ENSG00000079459 FDFT1 farnesyl-diphosphate farnesyltransferase 1 protein_coding Homo_sapiens

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