C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: geranylgeranyl diphosphate synthase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021302 Ggps1 10090 - 13:14052449-14063401 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000170957 Ggps1-201 14052449-14063401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170957
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170957 4.393±1.67 3.776±0.93 30.893±0.00 2.993±0.69 2.690±0.30 1.703±0.00 3.905±0.35 3.073±1.38 2.309±0.00 2.245±0.40 5.170±3.75 9.027±0.90 3.218±0.43

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004161 IEA dimethylallyltranstransferase activity
GO:0004311 ISS farnesyltranstransferase activity
GO:0004337 IDA geranyltranstransferase activity
GO:0005737 IEA cytoplasm
GO:0006720 ISS isoprenoid metabolic process
GO:0033384 IEA geranyl diphosphate biosynthetic process
GO:0033386 IEA geranylgeranyl diphosphate biosynthetic process
GO:0045337 IEA farnesyl diphosphate biosynthetic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023627 ggps1 geranylgeranyl diphosphate synthase 1 protein_coding Danio_rerio
ENSG00000152904 GGPS1 geranylgeranyl diphosphate synthase 1 protein_coding Homo_sapiens

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