C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021368 Tbc1d7 10090 - 13:43151744-43171501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021797 Tbc1d7-201 43151744-43171501 protein_coding
  ENSMUST00000179852 Tbc1d7-202 43151744-43171501 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021797ENSMUST00000179852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021797 2.592±1.15 2.283±0.16 2.622±0.09 4.664±0.59 5.512±2.70 1.070±0.58 4.596±1.28 3.489±1.48 1.189±0.39 3.478±1.33 3.183±0.76 4.365±1.97 5.170±2.35 1.589±0.50
ENSMUST00000179852 4.960±2.13 7.091±1.95 6.521±1.01 7.291±2.37 3.240±1.84 2.924±0.55 4.378±1.09 5.059±1.23 3.096±1.27 3.983±0.78 7.834±0.51 4.467±2.05 6.949±1.78 5.163±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BV CIL_0001BV_0003 CGP 13:42680623-43171501
CIL_0008MO CIL_0008MO_0002 VISTA 13:42895920-43497079
CIL_0003IB CIL_0003IB_0002 CGP 13:43151744-43304172

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0017137 IEA Rab GTPase binding
GO:0031398 ISS positive regulation of protein ubiquitination
GO:0031410 ISS cytoplasmic vesicle
GO:0032007 IMP negative regulation of TOR signaling
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0032862 IMP activation of Rho GTPase activity
GO:0033126 IEA positive regulation of GTP catabolic process
GO:0036064 IEA ciliary basal body
GO:0070848 IEA response to growth factor
GO:1902018 IEA negative regulation of cilium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029581 tbc1d7 TBC1 domain family, member 7 protein_coding Danio_rerio
ENSG00000145979 TBC1D7 TBC1 domain family, member 7 protein_coding Homo_sapiens

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