C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145979-ENSG00000145990 CGP 9606 6:13266542-13487662
GeneTranscriptPositionBiotype
ENSG00000112137 (PHACTR1)
phosphatase and actin regulator 1 		ENST00000332995 (PHACTR1-005) 12716805-13290484 protein_coding
ENST00000379329 (PHACTR1-004) 13272757-13283907 protein_coding
ENST00000379335 (PHACTR1-003) 13272672-13287481 protein_coding
ENST00000379348 (PHACTR1-010) 12718310-12934000 protein_coding
ENST00000379350 (PHACTR1-001) 12717661-13276123 protein_coding
ENST00000406205 (PHACTR1-006) 12749435-13184820 protein_coding
ENST00000415087 (PHACTR1-201) 13053363-13287840 protein_coding
ENST00000434977 (PHACTR1-002) 13053457-13230404 protein_coding
ENST00000481706 (PHACTR1-008) 13278002-13283546 processed_transcript
ENST00000482982 (PHACTR1-011) 12957359-13182578 processed_transcript
ENST00000489548 (PHACTR1-009) 13272212-13286197 processed_transcript
ENSG00000145979 (TBC1D7)
TBC1 domain family, member 7 		ENST00000343141 (TBC1D7-201) 13304954-13328583 protein_coding
ENST00000356436 (TBC1D7-008) 13304951-13328531 protein_coding
ENST00000379291 (TBC1D7-011) 13316698-13328531 protein_coding
ENST00000379300 (TBC1D7-009) 13304951-13328531 protein_coding
ENST00000379307 (TBC1D7-202) 13304954-13328583 protein_coding
ENST00000416436 (TBC1D7-001) 13316682-13328130 protein_coding
ENST00000420456 (TBC1D7-003) 13307600-13327818 protein_coding
ENST00000421203 (TBC1D7-014) 13274849-13328544 nonsense_mediated_decay
ENST00000422136 (TBC1D7-004) 13306445-13328531 protein_coding
ENST00000428109 (TBC1D7-002) 13316621-13328130 protein_coding
ENST00000446018 (TBC1D7-006) 13306491-13328531 protein_coding
ENST00000450347 (TBC1D7-010) 13306398-13328531 protein_coding
ENST00000452989 (TBC1D7-005) 13306398-13328531 protein_coding
ENST00000606214 (TBC1D7-012) 13266542-13326912 protein_coding
ENST00000606370 (TBC1D7-013) 13318718-13328555 protein_coding
ENST00000606530 (TBC1D7-016) 13326838-13328332 protein_coding
ENST00000606541 (TBC1D7-018) 13320832-13326912 protein_coding
ENST00000607208 (TBC1D7-017) 13307714-13320981 processed_transcript
ENST00000607230 (TBC1D7-015) 13323711-13328583 protein_coding
ENST00000607532 (TBC1D7-019) 13306645-13328544 processed_transcript
ENST00000607658 (TBC1D7-020) 13305618-13328458 protein_coding
ENSG00000145990 (GFOD1)
glucose-fructose oxidoreductase domain containing 1 		ENST00000379278 (GFOD1-003) 13469275-13486183 processed_transcript
ENST00000379284 (GFOD1-002) 13357830-13408137 protein_coding
ENST00000379287 (GFOD1-001) 13357830-13487555 protein_coding
ENST00000603223 (GFOD1-004) 13469268-13487662 protein_coding
ENST00000605067 (GFOD1-005) 13469268-13472044 processed_transcript
ENST00000612338 (GFOD1-201) 13363355-13486183 protein_coding
ENSG00000272379 (RP1-257A7.5)
 ENST00000606393 (RP1-257A7.5-002) 13290018-13290490 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003IB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021368-ENSMUSG00000051335 CGP 10090 13:43151744-43304172
GeneTranscriptPositionBiotype
ENSMUSG00000021368 (Tbc1d7)
TBC1 domain family, member 7 		ENSMUST00000021797 (Tbc1d7-201) 43151744-43171501 protein_coding
ENSMUST00000179852 (Tbc1d7-202) 43151744-43171501 protein_coding
ENSMUSG00000051335 (Gfod1)
glucose-fructose oxidoreductase domain containing 1 		ENSMUST00000055341 (Gfod1-201) 43195519-43304172 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IB_0001ENSG00000112137ENST00000332995ENST00000379350ENST00000415087ENST00000434977ENSG00000145979ENST00000343141ENST00000356436ENST00000379300ENST00000379307ENST00000422136ENST00000606214ENST00000606370ENST00000607208ENSG00000145990ENST00000379278ENST00000379284ENST00000379287ENST00000603223ENST00000605067ENSG00000272379ENST00000606393CIL_0003IB_0002ENSMUSG00000021368ENSMUST00000021797ENSMUST00000179852ENSMUSG00000051335ENSMUST00000055341
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112137 ENST00000332995 N/A N/A N/A 6.692±0.00 N/A 0.714±0.08 N/A N/A N/A 3.613±0.00 0.207±0.00 1.195±0.41 1.133±0.00 1.807±0.00
ENST00000379329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379350 N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A 0.921±0.00 N/A N/A
ENST00000406205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415087 1.311±0.00 N/A N/A 4.367±0.00 N/A N/A 5.839±2.54 N/A N/A N/A 0.152±0.00 N/A N/A N/A
ENST00000434977 N/A N/A N/A N/A N/A N/A N/A 0.984±0.00 N/A N/A N/A N/A N/A N/A
ENST00000481706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145979 ENST00000343141 N/A N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A N/A N/A N/A N/A N/A
ENST00000356436 3.912±0.00 N/A N/A N/A 6.895±0.00 3.711±0.00 N/A 9.177±0.00 2.429±0.00 N/A N/A 8.176±3.27 6.788±2.39 12.253±2.76
ENST00000379291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379300 N/A N/A N/A N/A N/A N/A N/A N/A 0.996±0.00 N/A 1.809±0.00 N/A 2.252±0.43 N/A
ENST00000379307 N/A N/A N/A N/A N/A N/A N/A N/A 2.717±0.00 N/A N/A 4.095±0.00 3.662±0.00 N/A
ENST00000416436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.067±0.00 N/A N/A N/A
ENST00000428109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606214 N/A N/A 1.399±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606370 N/A N/A N/A N/A 1.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.948±0.00
ENST00000607230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145990 ENST00000379278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.00
ENST00000379284 N/A N/A N/A N/A 0.894±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379287 14.086±0.00 2.464±0.00 0.238±0.00 6.462±1.41 2.799±1.06 1.605±1.37 5.097±3.29 1.296±0.55 1.646±0.25 2.297±0.72 4.316±2.56 0.527±0.21 1.398±0.29 0.561±0.45
ENST00000603223 N/A N/A N/A N/A N/A 0.646±0.00 1.179±0.00 N/A N/A N/A N/A 0.309±0.00 1.037±0.00 0.246±0.00
ENST00000605067 N/A N/A 0.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.422±0.00 N/A N/A
ENST00000612338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272379 ENST00000606393 N/A 12.855±0.00 N/A 51.194±0.00 N/A N/A 26.465±0.00 7.075±0.00 N/A 14.668±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021368 ENSMUST00000021797 2.592±1.15 2.283±0.16 2.622±0.09 4.664±0.59 5.512±2.70 1.070±0.58 4.596±1.28 3.489±1.48 1.189±0.39 3.478±1.33 3.183±0.76 4.365±1.97 5.170±2.35 1.589±0.50
ENSMUST00000179852 4.960±2.13 7.091±1.95 6.521±1.01 7.291±2.37 3.240±1.84 2.924±0.55 4.378±1.09 5.059±1.23 3.096±1.27 3.983±0.78 7.834±0.51 4.467±2.05 6.949±1.78 5.163±0.59
ENSMUSG00000051335 ENSMUST00000055341 4.181±1.47 2.433±0.25 1.745±0.16 4.344±2.46 3.425±0.59 1.413±0.08 6.265±0.84 0.968±0.10 0.531±0.21 7.951±0.68 0.845±0.17 2.756±0.75 2.342±1.45 0.124±0.06

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