C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: src homology 2 domain-containing transforming protein C3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021448 Shc3 10090 - 13:51431041-51567084 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021898 Shc3-201 51431041-51567084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021898
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021898 0.889±0.72 0.538±0.13 0.075±0.00 0.073±0.04 0.899±0.17 0.268±0.05 0.372±0.07 0.050±0.03 0.108±0.03 0.115±0.04 0.599±0.22 0.122±0.06 0.109±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000077 CIL_000077_0003 CGP 13:51408618-51567084
CIL_0002K1 CIL_0002K1_0002 CGP 13:51431041-51650660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007417 IEA central nervous system development
GO:0007611 IMP learning or memory
GO:0035249 IMP synaptic transmission, glutamatergic
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057731 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 protein_coding Danio_rerio
ENSG00000148082 SHC3 SHC (Src homology 2 domain containing) transforming protein 3 protein_coding Homo_sapiens

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