C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002K1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148082-ENSG00000123975 CGP 9606 9:89013145-89316703
GeneTranscriptPositionBiotype
ENSG00000123975 (CKS2)
CDC28 protein kinase regulatory subunit 2
ENST00000314355 (CKS2-001) 89311198-89316703 protein_coding
ENSG00000148082 (SHC3)
SHC (Src homology 2 domain containing) transforming protein 3
ENST00000375831 (SHC3-002) 89037366-89042137 protein_coding
ENST00000375835 (SHC3-001) 89013145-89178767 protein_coding
ENSG00000224945 (RP11-82L18.2)
ENST00000429700 (RP11-82L18.2-001) 89088887-89109934 sense_intronic
ENST00000456944 (RP11-82L18.2-002) 89088604-89109298 sense_intronic
ENSG00000265112 (MIR3153)
microRNA 3153
ENST00000580744 (MIR3153-201) 89312225-89312306 miRNA
CIL_0002K1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021448-ENSMUSG00000062248 CGP 10090 13:51431041-51650660
GeneTranscriptPositionBiotype
ENSMUSG00000021448 (Shc3)
src homology 2 domain-containing transforming protein C3
ENSMUST00000021898 (Shc3-201) 51431041-51567084 protein_coding
ENSMUSG00000062248 (Cks2)
CDC28 protein kinase regulatory subunit 2
ENSMUST00000075853 (Cks2-001) 51645232-51650660 protein_coding
ENSMUSG00000064672 (Gm22806)
predicted gene, 22806
ENSMUST00000082738 (Gm22806-201) 51648199-51648334 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002K1_0001ENSG00000123975ENST00000314355ENSG00000148082ENST00000375831ENST00000375835ENSG00000224945ENST00000429700ENST00000456944ENSG00000265112ENST00000580744CIL_0002K1_0002ENSMUSG00000021448ENSMUST00000021898ENSMUSG00000062248ENSMUST00000075853ENSMUSG00000064672ENSMUST00000082738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002K1_0001ENSG00000123975ENST00000314355ENSG00000148082ENST00000375831ENST00000375835ENSG00000224945ENST00000429700ENST00000456944ENSG00000265112ENST00000580744CIL_0002K1_0002ENSMUSG00000021448ENSMUST00000021898ENSMUSG00000062248ENSMUST00000075853ENSMUSG00000064672ENSMUST00000082738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123975 ENST00000314355 1.215±0.00 3.139±0.00 1.494±0.00 2.003±0.59 3.336±1.63 8.483±1.08 1.738±0.39 7.224±6.31 1.461±0.97 6.433±1.10 1.138±0.00 49.276±30.25 21.955±4.20 99.585±12.76
ENSG00000148082 ENST00000375831 N/A 0.223±0.00 N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A 0.140±0.00 0.070±0.02 N/A
ENST00000375835 0.227±0.00 N/A N/A N/A 0.138±0.04 0.266±0.17 0.056±0.01 0.044±0.00 0.203±0.19 0.367±0.07 0.027±0.00 0.189±0.07 0.081±0.02 0.179±0.02
ENSG00000224945 ENST00000429700 0.259±0.00 0.299±0.00 0.978±0.00 0.850±0.00 0.132±0.00 0.346±0.05 N/A N/A 0.514±0.45 1.937±0.00 0.128±0.00 0.723±0.54 0.280±0.09 0.252±0.11
ENST00000456944 0.057±0.00 0.087±0.00 N/A 0.484±0.00 0.375±0.00 0.272±0.00 0.079±0.00 1.161±0.00 0.075±0.00 0.648±0.12 N/A 1.097±0.50 0.323±0.11 0.602±0.26
ENSG00000265112 ENST00000580744 N/A N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A 2.787±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021448 ENSMUST00000021898 0.889±0.72 0.538±0.13 0.075±0.00 N/A 0.073±0.04 0.899±0.17 0.268±0.05 0.372±0.07 0.050±0.03 0.108±0.03 0.115±0.04 0.599±0.22 0.122±0.06 0.109±0.00
ENSMUSG00000062248 ENSMUST00000075853 6.072±3.37 7.901±1.03 7.134±0.76 23.999±17.29 3.715±0.80 17.707±1.07 0.632±0.20 21.138±1.60 114.427±108.83 3.761±0.61 0.316±0.30 19.792±5.36 51.848±39.17 47.515±18.86
ENSMUSG00000064672 ENSMUST00000082738 N/A N/A N/A N/A N/A N/A N/A N/A 10.945±5.78 N/A N/A 15.157±9.18 12.053±5.23 N/A

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