Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	solute carrier family 6 (neurotransmitter transporter), member 18
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000021612	Slc6a18	10090	-	13:73661750-73678023	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000022105		Slc6a18-201	73661750-73678023	protein_coding
	ENSMUST00000109679		Slc6a18-202	73661750-73678023	protein_coding
	ENSMUST00000109680		Slc6a18-203	73661750-73678023	protein_coding

Expression Patterns

Transcript ID	Adipose	Brain	Breast	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000022105	N/A	N/A	N/A	N/A	131.478±36.17	N/A	N/A	N/A	N/A	0.130±0.08	0.042±0.02
ENSMUST00000109679	0.019±0.00	0.045±0.00	0.044±0.02	0.010±0.00	N/A	0.012±0.01	0.033±0.01	0.041±0.01	0.032±0.00	0.059±0.04	0.032±0.00
ENSMUST00000109680	N/A	N/A	N/A	N/A	30.573±11.64	0.000±0.00	N/A	0.038±0.03	N/A	0.050±0.00	0.031±0.01

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000JR	CIL_0000JR_0002	CGP	13:73627001-73678023
CIL_0000JA	CIL_0000JA_0002	CGP	13:73661750-73704865

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003333	IDA	amino acid transmembrane transport
GO:0005215	TAS	transporter activity
GO:0005328	IEA	neurotransmitter:sodium symporter activity
GO:0005515	IPI	protein binding
GO:0005886	IDA	plasma membrane
GO:0005887	IEA	integral component of plasma membrane
GO:0006810	TAS	transport
GO:0006836	IEA	neurotransmitter transport
GO:0031526	IDA	brush border membrane

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000068387	slc6a18	solute carrier family 6, member 18	protein_coding	Danio_rerio
ENSG00000164363	SLC6A18	solute carrier family 6 (neutral amino acid transporter), member 18	protein_coding	Homo_sapiens

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