C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068387-ENSDARG00000018621 CGP 7955 19:624773-656417
GeneTranscriptPositionBiotype
ENSDARG00000018621 (slc6a19a)
solute carrier family 6 (neurotransmitter transporter), member 19a 		ENSDART00000025146 (slc6a19a-001) 642500-656417 protein_coding
ENSDARG00000068387 (slc6a18)
solute carrier family 6, member 18 		ENSDART00000098881 (slc6a18-201) 624773-636133 protein_coding
CIL_0000JA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021612-ENSMUSG00000021565 CGP 10090 13:73661750-73704865
GeneTranscriptPositionBiotype
ENSMUSG00000021565 (Slc6a19)
solute carrier family 6 (neurotransmitter transporter), member 19 		ENSMUST00000022048 (Slc6a19-001) 73679745-73700780 protein_coding
ENSMUST00000120322 (Slc6a19-004) 73679747-73692636 processed_transcript
ENSMUST00000123997 (Slc6a19-008) 73689087-73704865 processed_transcript
ENSMUST00000124406 (Slc6a19-005) 73689738-73700681 nonsense_mediated_decay
ENSMUST00000132085 (Slc6a19-003) 73679747-73700695 retained_intron
ENSMUST00000139087 (Slc6a19-006) 73689570-73692379 processed_transcript
ENSMUST00000140878 (Slc6a19-007) 73689776-73692254 processed_transcript
ENSMUSG00000021566 (Slc6a19os)
solute carrier family 6 (neurotransmitter transporter), member 19, opposite strand 		ENSMUST00000022049 (Slc6a19os-001) 73699826-73709850 antisense
ENSMUST00000160958 (Slc6a19os-002) 73703716-73708911 antisense
ENSMUSG00000021612 (Slc6a18)
solute carrier family 6 (neurotransmitter transporter), member 18 		ENSMUST00000022105 (Slc6a18-201) 73661750-73678023 protein_coding
ENSMUST00000109679 (Slc6a18-202) 73661750-73678023 protein_coding
ENSMUST00000109680 (Slc6a18-203) 73661750-73678023 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JA_0001ENSDARG00000018621ENSDART00000025146ENSDARG00000068387ENSDART00000098881CIL_0000JA_0002ENSMUSG00000021565ENSMUST00000022048ENSMUST00000120322ENSMUST00000123997ENSMUST00000124406ENSMUST00000132085ENSMUST00000139087ENSMUST00000140878ENSMUSG00000021566ENSMUST00000022049ENSMUST00000160958ENSMUSG00000021612ENSMUST00000022105ENSMUST00000109679ENSMUST00000109680
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JA_0001ENSDARG00000018621ENSDART00000025146ENSDARG00000068387ENSDART00000098881CIL_0000JA_0002ENSMUSG00000021565ENSMUST00000022048ENSMUST00000120322ENSMUST00000123997ENSMUST00000132085ENSMUST00000139087ENSMUST00000140878ENSMUSG00000021566ENSMUST00000022049ENSMUST00000160958ENSMUSG00000021612ENSMUST00000022105ENSMUST00000109679ENSMUST00000109680
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018621 ENSDART00000025146 N/A N/A N/A 0.275±0.08 N/A N/A 0.409±0.41 8.390±1.52 0.050±0.00 N/A 0.321±0.00 N/A N/A N/A
ENSDARG00000068387 ENSDART00000098881 N/A N/A N/A 0.070±0.04 N/A N/A 0.094±0.01 0.892±0.00 0.018±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021565 ENSMUST00000022048 N/A N/A N/A N/A N/A 0.406±0.15 N/A 196.688±4.30 N/A 1.663±1.14 N/A N/A 0.199±0.00 0.054±0.01
ENSMUST00000120322 0.061±0.02 0.051±0.01 0.025±0.01 0.050±0.03 0.364±0.15 0.516±0.19 0.028±0.01 N/A 0.283±0.23 0.031±0.00 0.035±0.02 0.134±0.09 0.365±0.23 0.039±0.00
ENSMUST00000123997 N/A 0.082±0.00 0.029±0.00 N/A 2.119±0.00 0.561±0.12 N/A 253.593±18.49 0.143±0.07 0.081±0.04 N/A 0.311±0.10 N/A N/A
ENSMUST00000124406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132085 N/A 0.086±0.00 0.009±0.00 N/A 0.144±0.00 0.121±0.01 N/A N/A 0.058±0.00 N/A N/A 0.059±0.01 0.172±0.09 N/A
ENSMUST00000139087 N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSMUST00000140878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 0.341±0.00 N/A 0.105±0.00
ENSMUSG00000021566 ENSMUST00000022049 0.038±0.00 0.082±0.03 0.018±0.00 N/A 0.036±0.02 N/A 0.050±0.02 0.212±0.10 0.014±0.00 0.111±0.09 0.030±0.00 0.030±0.00 0.066±0.05 0.031±0.01
ENSMUST00000160958 N/A 0.197±0.00 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 0.118±0.01
ENSMUSG00000021612 ENSMUST00000022105 N/A N/A N/A N/A N/A N/A N/A 131.478±36.17 N/A N/A N/A N/A 0.130±0.08 0.042±0.02
ENSMUST00000109679 0.019±0.00 N/A N/A 0.045±0.00 0.044±0.02 N/A 0.010±0.00 N/A 0.012±0.01 0.033±0.01 0.041±0.01 0.032±0.00 0.059±0.04 0.032±0.00
ENSMUST00000109680 N/A N/A N/A N/A N/A N/A N/A 30.573±11.64 0.000±0.00 N/A 0.038±0.03 N/A 0.050±0.00 0.031±0.01

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