C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021712 Trim23 10090 + 13:104178797-104203372 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022225 Trim23-001 104178797-104203017 protein_coding
  ENSMUST00000069174 Trim23-004 104179098-104202048 protein_coding
  ENSMUST00000069187 Trim23-002 104178839-104203372 protein_coding
  ENSMUST00000160230 Trim23-003 104178861-104189729 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022225ENSMUST00000069187ENSMUST00000160230
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022225 1.889±0.26 1.160±0.43 6.423±0.12 10.387±2.44 1.702±0.68 1.379±0.50 2.445±0.23 2.104±0.56 2.898±1.64 2.885±0.60 4.432±0.70 3.160±1.68 5.116±1.76 5.328±1.16
ENSMUST00000069187 0.375±0.03 0.590±0.00 1.451±0.02 4.097±0.07 0.856±0.37 0.294±0.00 0.441±0.05 0.452±0.05 0.736±0.25 N/A N/A 1.041±0.07 0.797±0.25 N/A
ENSMUST00000160230 10.737±2.08 4.206±2.38 N/A N/A 6.988±1.93 3.044±1.67 8.160±1.02 7.799±0.87 2.527±0.34 6.472±0.96 N/A 9.522±5.13 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0003924 ISS GTPase activity
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005525 ISS GTP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005765 ISS lysosomal membrane
GO:0006184 ISS GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008270 IEA zinc ion binding
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019003 ISS GDP binding
GO:0042802 IEA identical protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069420 trim23 tripartite motif containing 23 protein_coding Danio_rerio
ENSG00000113595 TRIM23 tripartite motif containing 23 protein_coding Homo_sapiens

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