C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021716 Srek1ip1 10090 + 13:104792484-104839274 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022230 Srek1ip1-001 104817177-104839274 protein_coding
  ENSMUST00000137278 Srek1ip1-004 104826658-104834269 retained_intron
  ENSMUST00000145661 Srek1ip1-003 104792484-104838360 processed_transcript
  ENSMUST00000147061 Srek1ip1-005 104834046-104839271 retained_intron
  ENSMUST00000156105 Srek1ip1-002 104817239-104838669 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022230ENSMUST00000145661ENSMUST00000156105
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022230 8.272±0.56 4.894±2.13 7.642±0.03 6.498±3.63 7.707±0.47 8.509±1.42 7.281±0.34 10.367±1.29 6.538±1.25 5.092±0.35 2.880±0.46 9.489±2.79 5.319±2.15 2.617±0.51
ENSMUST00000145661 N/A N/A N/A 8.713±0.00 N/A N/A N/A N/A N/A N/A 1.394±0.11 7.696±4.95 5.932±3.91 17.333±0.00
ENSMUST00000156105 N/A 1.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043728 srek1ip1 SREK1-interacting protein 1 protein_coding Danio_rerio
ENSG00000153006 SREK1IP1 SREK1-interacting protein 1 protein_coding Homo_sapiens

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