C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022230 Srek1ip1-001 ENSMUSG00000021716 10090 + 13:104817177-104839274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022230
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022230 8.272±0.56 4.894±2.13 7.642±0.03 6.498±3.63 7.707±0.47 8.509±1.42 7.281±0.34 10.367±1.29 6.538±1.25 5.092±0.35 2.880±0.46 9.489±2.79 5.319±2.15 2.617±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000495198 SREK1IP1-004 retained_intron Homo_sapiens 0 316
ENST00000513458 SREK1IP1-001 protein_coding Homo_sapiens 0 545
ENST00000603072 RP1-152L7.8-001 processed_pseudogene Homo_sapiens 0 209
ENST00000622404 SREK1IP1-201 protein_coding Homo_sapiens 0 529

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