C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021737 Psmd6 10090 - 14:14112184-14120984 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022256 Psmd6-001 14112184-14120984 protein_coding
  ENSMUST00000127228 Psmd6-003 14116195-14117352 retained_intron
  ENSMUST00000147471 Psmd6-002 14119633-14120933 retained_intron
  ENSMUST00000153237 Psmd6-004 14113910-14116550 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022256ENSMUST00000127228ENSMUST00000147471
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022256 19.247±1.61 13.359±4.46 33.383±6.32 37.665±4.65 13.580±5.54 11.663±4.11 16.951±1.33 22.780±2.62 29.560±9.05 11.455±1.53 69.699±2.34 16.078±15.35 65.014±13.43 20.009±0.44
ENSMUST00000127228 6.735±0.00 N/A N/A N/A 4.904±1.17 2.652±0.00 N/A N/A N/A 5.433±0.94 N/A 3.508±0.76 N/A N/A
ENSMUST00000147471 N/A 24.486±5.60 N/A 51.720±0.00 N/A 3.679±1.95 N/A N/A 7.021±1.17 N/A N/A 18.377±31.66 133.261±45.35 172.964±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079H CIL_00079H_0002 CGP 14:14012491-14120984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0022624 IDA proteasome accessory complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070674 psmd6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein_coding Danio_rerio
ENSG00000163636 PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 protein_coding Homo_sapiens

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