C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127228 Psmd6-003 ENSMUSG00000021737 10090 - 14:14116195-14117352 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungOvaryENSMUST00000127228
Transcript ID Adipose Breast Colon Lung Ovary
ENSMUST00000127228 6.735±0.00 4.904±1.17 2.652±0.00 5.433±0.94 3.508±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079H CIL_00079H_0002 CGP 14:14012491-14120984

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295901 PSMD6-001 protein_coding Homo_sapiens 0 525
ENST00000394431 PSMD6-201 protein_coding Homo_sapiens 0 525
ENST00000476464 PSMD6-004 retained_intron Homo_sapiens 0 525
ENST00000480205 PSMD6-011 protein_coding Homo_sapiens 0 399
ENST00000482510 PSMD6-003 protein_coding Homo_sapiens 0 525
ENST00000492933 PSMD6-002 protein_coding Homo_sapiens 0 525
ENST00000497315 PSMD6-010 retained_intron Homo_sapiens 0 462

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