C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal peptidase complex subunit 1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021917 Spcs1 10090 - 14:30999826-31001672 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000160342 Spcs1-003 30999826-31001672 protein_coding
  ENSMUST00000160663 Spcs1-005 31000217-31001350 retained_intron
  ENSMUST00000161219 Spcs1-004 31000396-31001367 protein_coding
  ENSMUST00000161343 Spcs1-002 30999828-31001369 retained_intron
  ENSMUST00000162092 Spcs1-001 30999826-31001609 protein_coding
  ENSMUST00000182501 Spcs1-006 30999827-31001363 protein_coding
  ENSMUST00000186131 Spcs1-201 30999827-31001666 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162092ENSMUST00000182501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 144.649±17.66
ENSMUST00000182501 123.526±2.02 87.871±9.32 146.814±6.11 128.701±55.90 83.872±25.30 67.099±13.08 95.232±9.69 146.862±23.78 164.348±78.53 105.248±20.34 92.757±5.11 90.729±14.55 161.991±31.74 214.512±35.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005787 IEA signal peptidase complex
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008233 IEA peptidase activity
GO:0016021 IEA integral component of membrane
GO:0030176 ISS integral component of endoplasmic reticulum membrane
GO:0043022 IDA ribosome binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059298 spcs1 signal peptidase complex subunit 1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000114902 SPCS1 signal peptidase complex subunit 1 homolog (S. cerevisiae) protein_coding Homo_sapiens

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