C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal peptidase complex subunit 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182501 Spcs1-006 ENSMUSG00000021917 10090 - 14:30999827-31001363 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182501
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182501 123.526±2.02 87.871±9.32 146.814±6.11 128.701±55.90 83.872±25.30 67.099±13.08 95.232±9.69 146.862±23.78 164.348±78.53 105.248±20.34 92.757±5.11 90.729±14.55 161.991±31.74 214.512±35.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005787 IEA signal peptidase complex
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008233 IEA peptidase activity
GO:0030176 ISS integral component of endoplasmic reticulum membrane
GO:0043022 IDA ribosome binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233025 SPCS1-201 protein_coding Homo_sapiens 0 573
ENST00000423431 SPCS1-004 protein_coding Homo_sapiens 0 525
ENST00000448693 SPCS1-002 retained_intron Homo_sapiens 0 272
ENST00000474945 SPCS1-003 retained_intron Homo_sapiens 0 507
ENST00000602728 SPCS1-006 protein_coding Homo_sapiens 0 573
ENST00000619898 SPCS1-001 protein_coding Homo_sapiens 0 573

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