C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TSC22 domain family, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022010 Tsc22d1 10090 + 14:76414961-76507765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022587 Tsc22d1-001 76504478-76507765 protein_coding
  ENSMUST00000048371 Tsc22d1-002 76415587-76507762 protein_coding
  ENSMUST00000101618 Tsc22d1-003 76488436-76507170 protein_coding
  ENSMUST00000110888 Tsc22d1-006 76414961-76507762 protein_coding
  ENSMUST00000133224 Tsc22d1-008 76505098-76507002 protein_coding
  ENSMUST00000134109 Tsc22d1-007 76504530-76505737 protein_coding
  ENSMUST00000140251 Tsc22d1-016 76476917-76506930 protein_coding
  ENSMUST00000142683 Tsc22d1-004 76487759-76506998 protein_coding
  ENSMUST00000175655 Tsc22d1-015 76438933-76440382 retained_intron
  ENSMUST00000175811 Tsc22d1-014 76437766-76440382 processed_transcript
  ENSMUST00000175984 Tsc22d1-012 76418651-76440340 nonsense_mediated_decay
  ENSMUST00000176581 Tsc22d1-011 76418648-76438999 protein_coding
  ENSMUST00000176886 Tsc22d1-010 76418354-76441628 nonsense_mediated_decay
  ENSMUST00000177207 Tsc22d1-005 76504214-76507763 protein_coding
  ENSMUST00000177333 Tsc22d1-009 76416114-76416643 processed_transcript
  ENSMUST00000177471 Tsc22d1-013 76418828-76440412 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022587ENSMUST00000048371ENSMUST00000101618ENSMUST00000110888ENSMUST00000133224ENSMUST00000140251ENSMUST00000142683ENSMUST00000177207
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022587 103.614±27.72 659.442±46.23 110.824±6.25 146.845±35.51 35.443±7.11 116.746±19.77 115.312±16.46 70.961±6.92 45.523±22.73 99.437±8.10 13.587±1.13 364.238±120.45 204.389±109.39 39.565±14.74
ENSMUST00000048371 8.381±3.84 N/A 9.387±0.48 34.133±4.80 4.283±0.87 7.546±1.88 3.679±0.00 5.768±1.03 N/A 5.763±1.17 13.350±1.24 19.521±2.89 9.696±0.00 23.952±8.82
ENSMUST00000101618 N/A N/A N/A N/A 22.845±3.08 55.743±0.00 N/A N/A N/A N/A N/A 102.186±0.00 N/A N/A
ENSMUST00000110888 N/A N/A N/A N/A 2.666±0.33 5.144±0.70 N/A 3.229±0.00 N/A 3.117±0.00 5.759±0.65 16.045±0.00 N/A 5.858±0.04
ENSMUST00000133224 N/A N/A N/A N/A N/A 88.522±7.11 N/A N/A N/A N/A N/A 203.862±5.08 N/A N/A
ENSMUST00000140251 N/A N/A N/A N/A N/A 104.691±23.33 N/A N/A N/A N/A N/A 211.535±43.02 N/A 115.667±0.00
ENSMUST00000142683 N/A N/A N/A N/A N/A N/A N/A N/A 5.688±1.63 N/A N/A N/A N/A N/A
ENSMUST00000177207 N/A N/A 25.359±0.00 N/A 11.561±0.00 N/A N/A N/A N/A N/A N/A 128.348±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008284 IDA positive regulation of cell proliferation
GO:0043065 IDA positive regulation of apoptotic process
GO:0043066 IDA negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038306 tsc22d1 TSC22 domain family, member 1 protein_coding Danio_rerio
ENSG00000102804 TSC22D1 TSC22 domain family, member 1 protein_coding Homo_sapiens

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