C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048371 Tsc22d1-002 ENSMUSG00000022010 10090 + 14:76415587-76507762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000048371
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000048371 8.381±3.84 9.387±0.48 34.133±4.80 4.283±0.87 7.546±1.88 3.679±0.00 5.768±1.03 5.763±1.17 13.350±1.24 19.521±2.89 9.696±0.00 23.952±8.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008284 IDA positive regulation of cell proliferation
GO:0043065 IDA positive regulation of apoptotic process
GO:0043066 IDA negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261489 TSC22D1-002 protein_coding Homo_sapiens 0 985
ENST00000361875 TSC22D2-001 protein_coding Homo_sapiens 9e-28 132
ENST00000458659 TSC22D1-001 protein_coding Homo_sapiens 0 4588
ENST00000460316 TSC22D2-008 retained_intron Homo_sapiens 7e-29 132
ENST00000460842 TSC22D1-006 processed_transcript Homo_sapiens 0 287
ENST00000466814 TSC22D2-003 protein_coding Homo_sapiens 2e-28 132
ENST00000480589 TSC22D2-005 protein_coding Homo_sapiens 4e-16 90
ENST00000485421 TSC22D2-004 nonsense_mediated_decay Homo_sapiens 6e-29 132
ENST00000486464 TSC22D1-005 nonsense_mediated_decay Homo_sapiens 0 538
ENST00000487881 TSC22D1-003 processed_transcript Homo_sapiens 0 254
ENST00000493016 TSC22D1-008 protein_coding Homo_sapiens 0 778
ENST00000496314 TSC22D1-004 processed_transcript Homo_sapiens 0 394
ENST00000496838 TSC22D1-010 retained_intron Homo_sapiens 0 318
ENST00000501704 TSC22D1-201 protein_coding Homo_sapiens 0 2209
ENST00000611198 TSC22D1-202 protein_coding Homo_sapiens 0 985
ENST00000622051 TSC22D1-203 protein_coding Homo_sapiens 0 985

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