C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TDP-glucose 4,6-dehydratase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022130 Tgds 10090 - 14:118111911-118132765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022727 Tgds-201 118111911-118132765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022727
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022727 6.543±0.59 3.652±1.57 3.879±0.33 1.267±0.30 3.857±1.02 4.473±0.93 2.603±0.41 4.529±1.06 6.321±2.54 4.282±0.33 1.160±0.24 4.934±1.36 7.648±2.60 1.543±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000890 CIL_000890_0002 VISTA 14:117893836-118495430
CIL_0008KC CIL_0008KC_0002 VISTA 14:117929617-118531411
CIL_0000E7 CIL_0000E7_0002 CGP 14:118012792-118132765
CIL_0000E6 CIL_0000E6_0002 CGP 14:118111911-118164232

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008460 IEA dTDP-glucose 4,6-dehydratase activity
GO:0009225 IEA nucleotide-sugar metabolic process
GO:0050662 IEA coenzyme binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015622 tgds TDP-glucose 4,6-dehydratase protein_coding Danio_rerio
ENSG00000088451 TGDS TDP-glucose 4,6-dehydratase protein_coding Homo_sapiens

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