C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: short chain dehydrogenase/reductase family 39U, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022223 Sdr39u1 10090 - 14:55897286-55900232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111325 Sdr39u1-201 55897286-55900232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111325 22.822±2.57 18.291±7.21 20.797±2.36 20.964±1.93 17.753±7.18 21.507±5.18 44.910±7.11 46.977±4.88 7.354±2.42 17.263±1.67 48.783±6.90 13.916±4.12 9.901±0.57 17.580±7.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OB CIL_0004OB_0002 CGP 14:55884969-55900232
CIL_0004OA CIL_0004OA_0002 CGP 14:55897286-55944661

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0016491 IEA oxidoreductase activity
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068215 sdr39u1 short chain dehydrogenase/reductase family 39U, member 1 protein_coding Danio_rerio
ENSG00000100445 SDR39U1 short chain dehydrogenase/reductase family 39U, member 1 protein_coding Homo_sapiens

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