C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: defective in sister chromatid cohesion 1 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022422 Dscc1 10090 - 15:55076099-55090491 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023059 Dscc1-001 55076099-55090491 protein_coding
  ENSMUST00000110231 Dscc1-002 55076102-55090480 protein_coding
  ENSMUST00000143523 Dscc1-003 55083719-55087757 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023059ENSMUST00000110231ENSMUST00000143523
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023059 0.427±0.26 0.862±0.41 0.211±0.06 1.093±0.70 0.812±0.15 1.165±0.24 0.029±0.00 0.116±0.03 5.109±4.84 0.254±0.06 0.033±0.01 1.755±0.83 3.970±3.42 3.614±4.50
ENSMUST00000110231 0.270±0.19 N/A 0.167±0.02 0.460±0.00 0.264±0.07 0.367±0.17 0.093±0.01 0.032±0.00 1.307±0.81 N/A 0.042±0.01 0.822±0.27 0.715±0.30 1.260±0.40
ENSMUST00000143523 0.035±0.02 N/A N/A 0.131±0.00 0.044±0.02 0.152±0.00 0.015±0.00 0.026±0.02 0.408±0.00 0.025±0.01 0.013±0.00 0.139±0.07 0.107±0.08 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T2 CIL_0002T2_0002 CGP 15:55015129-55090491

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0000785 ISS chromatin
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005654 IEA nucleoplasm
GO:0006260 IEA DNA replication
GO:0006275 ISS regulation of DNA replication
GO:0034088 ISS maintenance of mitotic sister chromatid cohesion
GO:0034421 ISS post-translational protein acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019907 dscc1 defective in sister chromatid cohesion 1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000136982 DSCC1 DNA replication and sister chromatid cohesion 1 protein_coding Homo_sapiens

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