C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: defective in sister chromatid cohesion 1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023059 Dscc1-001 ENSMUSG00000022422 10090 - 15:55076099-55090491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023059 0.427±0.26 0.862±0.41 0.211±0.06 1.093±0.70 0.812±0.15 1.165±0.24 0.029±0.00 0.116±0.03 5.109±4.84 0.254±0.06 0.033±0.01 1.755±0.83 3.970±3.42 3.614±4.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T2 CIL_0002T2_0002 CGP 15:55015129-55090491

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0000785 ISS chromatin
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005654 IEA nucleoplasm
GO:0006260 IEA DNA replication
GO:0006275 ISS regulation of DNA replication
GO:0034088 ISS maintenance of mitotic sister chromatid cohesion
GO:0034421 ISS post-translational protein acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313655 DSCC1-001 protein_coding Homo_sapiens 0 1164
ENST00000521795 DSCC1-002 retained_intron Homo_sapiens 0 316

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