C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002T2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064313-ENSG00000136982 CGP 9606 8:119730775-119856010
GeneTranscriptPositionBiotype
ENSG00000064313 (TAF2)
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa 		ENST00000378164 (TAF2-001) 119730775-119832863 protein_coding
ENST00000519355 (TAF2-006) 119746866-119767128 processed_transcript
ENST00000521007 (TAF2-002) 119803961-119832834 nonsense_mediated_decay
ENST00000523078 (TAF2-005) 119756056-119762908 retained_intron
ENST00000523098 (TAF2-007) 119760455-119762534 nonsense_mediated_decay
ENST00000523734 (TAF2-004) 119789679-119791874 retained_intron
ENST00000523904 (TAF2-003) 119788354-119797830 protein_coding
ENST00000526969 (TAF2-009) 119732062-119744586 retained_intron
ENST00000529653 (TAF2-008) 119731815-119760668 protein_coding
ENSG00000136982 (DSCC1)
DNA replication and sister chromatid cohesion 1 		ENST00000313655 (DSCC1-001) 119833976-119856010 protein_coding
ENST00000521795 (DSCC1-002) 119852758-119855858 retained_intron
ENSG00000279347 (RP11-85I17.2)
 ENST00000623964 (RP11-85I17.2-001) 119838736-119840385 TEC
CIL_0002T2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037343-ENSMUSG00000022422 CGP 10090 15:55015129-55090491
GeneTranscriptPositionBiotype
ENSMUSG00000022422 (Dscc1)
defective in sister chromatid cohesion 1 homolog (S. cerevisiae) 		ENSMUST00000023059 (Dscc1-001) 55076099-55090491 protein_coding
ENSMUST00000110231 (Dscc1-002) 55076102-55090480 protein_coding
ENSMUST00000143523 (Dscc1-003) 55083719-55087757 retained_intron
ENSMUSG00000037343 (Taf2)
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor 		ENSMUST00000041733 (Taf2-201) 55015129-55072152 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002T2_0001ENSG00000064313ENST00000378164ENST00000519355ENST00000521007ENST00000523078ENST00000523098ENST00000523734ENST00000523904ENST00000526969ENST00000529653ENSG00000136982ENST00000313655ENST00000521795ENSG00000279347ENST00000623964CIL_0002T2_0002ENSMUSG00000022422ENSMUST00000023059ENSMUST00000110231ENSMUST00000143523ENSMUSG00000037343ENSMUST00000041733
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002T2_0001ENSG00000064313ENST00000378164ENST00000523904ENST00000526969ENSG00000136982ENST00000313655ENST00000521795ENSG00000279347ENST00000623964CIL_0002T2_0002ENSMUSG00000022422ENSMUST00000023059ENSMUST00000110231ENSMUST00000143523ENSMUSG00000037343ENSMUST00000041733
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064313 ENST00000378164 2.164±0.00 2.136±0.00 N/A 1.483±0.40 2.215±1.36 2.130±0.62 1.461±0.15 0.968±0.26 2.291±1.22 1.666±0.00 0.704±0.00 2.982±0.73 2.246±0.99 4.244±0.00
ENST00000519355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523904 N/A N/A 3.294±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526969 N/A N/A 8.820±0.00 N/A N/A N/A N/A 9.364±0.00 N/A N/A N/A N/A N/A N/A
ENST00000529653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136982 ENST00000313655 0.382±0.00 0.812±0.00 0.145±0.00 0.888±0.31 0.654±0.27 0.579±0.23 0.310±0.06 0.342±0.18 0.581±0.42 0.047±0.00 0.399±0.27 7.619±7.73 1.570±1.45 2.719±0.84
ENST00000521795 N/A N/A N/A 0.546±0.00 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A
ENSG00000279347 ENST00000623964 0.105±0.00 0.434±0.00 N/A 0.132±0.10 0.439±0.26 0.026±0.00 0.075±0.03 0.071±0.00 0.198±0.19 0.045±0.00 N/A 0.427±0.45 0.050±0.02 0.246±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022422 ENSMUST00000023059 0.427±0.26 0.862±0.41 0.211±0.06 1.093±0.70 0.812±0.15 1.165±0.24 0.029±0.00 0.116±0.03 5.109±4.84 0.254±0.06 0.033±0.01 1.755±0.83 3.970±3.42 3.614±4.50
ENSMUST00000110231 0.270±0.19 N/A 0.167±0.02 0.460±0.00 0.264±0.07 0.367±0.17 0.093±0.01 0.032±0.00 1.307±0.81 N/A 0.042±0.01 0.822±0.27 0.715±0.30 1.260±0.40
ENSMUST00000143523 0.035±0.02 N/A N/A 0.131±0.00 0.044±0.02 0.152±0.00 0.015±0.00 0.026±0.02 0.408±0.00 0.025±0.01 0.013±0.00 0.139±0.07 0.107±0.08 N/A
ENSMUSG00000037343 ENSMUST00000041733 5.675±0.82 4.833±0.70 2.506±0.13 7.732±3.92 4.745±1.13 5.273±0.60 3.010±0.25 3.571±0.59 4.656±2.85 6.766±0.18 1.686±0.36 6.366±1.70 5.632±2.28 9.240±3.27

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