C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and BTB domain containing 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022708 Zbtb20 10090 + 16:42875881-43642602 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033479 Zbtb20-201 43620877-43623955 protein_coding
  ENSMUST00000079441 Zbtb20-202 43247284-43619069 protein_coding
  ENSMUST00000114690 Zbtb20-011 43508263-43619127 protein_coding
  ENSMUST00000114691 Zbtb20-005 43247284-43619096 protein_coding
  ENSMUST00000114694 Zbtb20-001 42907652-43642602 protein_coding
  ENSMUST00000114695 Zbtb20-012 43510308-43619137 protein_coding
  ENSMUST00000122875 Zbtb20-020 43503697-43577174 processed_transcript
  ENSMUST00000123047 Zbtb20-019 43503622-43571775 protein_coding
  ENSMUST00000126100 Zbtb20-017 43503614-43577193 protein_coding
  ENSMUST00000126354 Zbtb20-003 42875881-43463175 retained_intron
  ENSMUST00000131689 Zbtb20-006 42907392-43072468 processed_transcript
  ENSMUST00000132881 Zbtb20-007 42907542-43569781 processed_transcript
  ENSMUST00000134537 Zbtb20-004 43236039-43303174 retained_intron
  ENSMUST00000139491 Zbtb20-002 43363464-43578751 retained_intron
  ENSMUST00000141941 Zbtb20-014 43363048-43569761 processed_transcript
  ENSMUST00000146708 Zbtb20-013 43235880-43609573 protein_coding
  ENSMUST00000148775 Zbtb20-016 43364204-43609527 protein_coding
  ENSMUST00000151244 Zbtb20-008 42907645-43577725 protein_coding
  ENSMUST00000151290 Zbtb20-010 42907652-43463074 retained_intron
  ENSMUST00000156367 Zbtb20-015 43363873-43609520 protein_coding
  ENSMUST00000156981 Zbtb20-018 43503642-43609762 protein_coding
  ENSMUST00000162745 Zbtb20-021 43508157-43569781 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114690ENSMUST00000114691ENSMUST00000114694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114690 6.775±0.00 12.899±2.68 N/A N/A 8.875±2.42 3.544±1.07 N/A N/A 4.411±0.00 5.941±0.00 N/A 17.387±5.02 1.316±0.37 0.781±0.00
ENSMUST00000114691 N/A 5.616±1.07 N/A N/A N/A 2.915±0.64 N/A 4.344±0.55 3.838±0.20 6.286±0.00 N/A 8.941±3.12 N/A 2.430±0.00
ENSMUST00000114694 2.680±1.51 5.736±0.52 5.771±4.26 4.527±0.83 2.619±1.54 1.506±0.60 2.526±0.13 1.808±0.68 0.199±0.10 4.555±1.63 0.813±0.00 6.998±1.25 0.211±0.00 0.732±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WB CIL_0007WB_0002 VISTA 16:42481027-43082864
CIL_0008BK CIL_0008BK_0002 VISTA 16:42780155-43380908
CIL_0008BL CIL_0008BL_0002 VISTA 16:42821972-43423556

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005586 zbtb20 zinc finger and BTB domain containing 20 protein_coding Danio_rerio
ENSG00000181722 ZBTB20 zinc finger and BTB domain containing 20 protein_coding Homo_sapiens

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