C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: THAP domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100125 Thap7-001 ENSMUSG00000022760 10090 - 16:17527982-17531136 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100125 9.772±0.78 18.994±4.15 12.406±2.19 8.740±4.11 9.853±4.04 11.644±2.53 4.461±0.97 17.508±2.28 9.603±2.42 10.590±1.32 3.002±0.71 19.015±7.07 8.919±4.96 16.628±7.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0002X2 CIL_0002X2_0002 CGP 16:17508688-17531136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0016607 IEA nuclear speck
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0047485 IEA protein N-terminus binding
GO:0070742 IEA C2H2 zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215742 THAP7-001 protein_coding Homo_sapiens 0 1155
ENST00000399133 THAP7-003 protein_coding Homo_sapiens 0 1210
ENST00000466670 THAP7-007 retained_intron Homo_sapiens 0 398
ENST00000471073 THAP7-004 retained_intron Homo_sapiens 0 802
ENST00000471723 THAP7-006 retained_intron Homo_sapiens 0 191
ENST00000476667 THAP7-002 retained_intron Homo_sapiens 0 802
ENST00000488975 THAP7-008 retained_intron Homo_sapiens 0 243
ENST00000498406 THAP7-005 retained_intron Homo_sapiens 0 1037

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