C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 13B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022911 Arl13b 10090 - 16:62793685-62847040 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089289 Arl13b-001 62793685-62847040 protein_coding
  ENSMUST00000132902 Arl13b-002 62825605-62847040 retained_intron
  ENSMUST00000141665 Arl13b-003 62795353-62802836 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089289ENSMUST00000132902ENSMUST00000141665
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089289 1.252±0.61 0.549±0.19 2.963±0.02 2.257±0.85 1.041±0.48 1.204±0.63 0.505±0.27 1.027±0.15 0.961±0.38 1.695±0.52 0.495±0.20 1.508±0.86 5.547±1.62 N/A
ENSMUST00000132902 N/A 3.288±0.09 N/A N/A 0.867±0.39 0.872±0.36 N/A N/A N/A 1.080±0.43 N/A 1.293±0.00 N/A N/A
ENSMUST00000141665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.568±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003B0 CIL_0003B0_0002 CGP 16:62793685-62847040

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001947 IMP heart looping
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005929 IDA cilium
GO:0007224 IMP smoothened signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007368 IMP determination of left/right symmetry
GO:0009953 IMP dorsal/ventral pattern formation
GO:0021532 IMP neural tube patterning
GO:0021830 IMP interneuron migration from the subpallium to the cortex
GO:0021943 IMP formation of radial glial scaffolds
GO:0035058 IMP nonmotile primary cilium assembly
GO:0042384 IMP cilium assembly
GO:0060170 IDA ciliary membrane
GO:0070986 IMP left/right axis specification
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012763 arl13b ADP-ribosylation factor-like 13b protein_coding Danio_rerio
ENSG00000169379 ARL13B ADP-ribosylation factor-like 13B protein_coding Homo_sapiens

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