C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: akirin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023075 Akirin1 10090 - 4:123734559-123750345 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102636 Akirin1-001 123734559-123750345 protein_coding
  ENSMUST00000142778 Akirin1-003 123737814-123743507 processed_transcript
  ENSMUST00000153472 Akirin1-002 123738940-123750231 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102636ENSMUST00000153472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102636 11.996±6.40 12.706±2.54 11.015±1.85 10.872±3.16 13.564±0.81 15.332±1.66 6.281±1.75 8.532±2.41 8.622±2.92 13.401±1.61 8.910±2.26 14.422±4.22 13.523±5.05 15.532±5.89
ENSMUST00000153472 N/A 59.987±24.32 N/A N/A 14.241±3.60 13.665±0.00 N/A N/A N/A N/A N/A 9.972±2.50 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0001ZS CIL_0001ZS_0002 CGP 4:123734559-123829904

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0008150 ND biological_process
GO:0031965 IEA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039969 akirin1 akirin 1 protein_coding Danio_rerio
ENSG00000174574 AKIRIN1 akirin 1 protein_coding Homo_sapiens

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