C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: akirin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174574 AKIRIN1 9606 + 1:38991223-39006059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372984 AKIRIN1-005 38991288-39004854 protein_coding
  ENST00000432648 AKIRIN1-001 38991223-39006059 protein_coding
  ENST00000446189 AKIRIN1-004 38991288-39004761 protein_coding
  ENST00000531822 AKIRIN1-007 38991496-39004381 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372984ENST00000432648ENST00000446189ENST00000531822
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372984 2.376±0.00 6.084±0.00 N/A 21.324±0.00 6.972±0.00 4.662±2.90 8.502±0.00 11.142±0.00 N/A 4.628±0.00 N/A 10.807±5.36 17.107±0.00 30.991±15.81
ENST00000432648 1.709±0.00 3.753±0.00 N/A 15.144±6.59 1.898±0.42 5.614±3.88 2.458±0.00 4.711±2.71 10.437±4.04 6.389±5.31 5.435±0.00 8.693±4.88 10.451±0.25 11.545±5.83
ENST00000446189 N/A N/A 3.545±0.00 N/A 2.987±0.00 N/A N/A N/A N/A N/A 1.665±0.00 22.156±0.00 14.042±0.00 40.836±0.00
ENST00000531822 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.376±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PZ CIL_0008PZ_0001 VISTA 1:38426937-39028462
CIL_0008G7 CIL_0008G7_0001 VISTA 1:38483085-39084457
CIL_0007Q3 CIL_0007Q3_0001 VISTA 1:38525828-39126769
CIL_000990 CIL_000990_0001 VISTA 1:38863737-39466035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039969 akirin1 akirin 1 protein_coding Danio_rerio
ENSMUSG00000023075 Akirin1 akirin 1 protein_coding Mus_musculus

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